RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 FGGYQ96C11 551 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 ADAT3Q96EY9 351 aaPredicted RBP13.5□□□□□ -0.25
LIMS1-202ENST00000338045 LIN7BQ9HAP6 207 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 ABCB10Q9NRK6 738 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 BOD1L1Q8NFC6 3051 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 PTPRQQ9UMZ3 2332 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 ITGA5P08648 1049 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 DDOSTP39656 456 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 HGFACQ04756 655 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 C4orf46Q504U0 113 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 PABPC1L2AQ5JQF8 200 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 SFRP5Q5T4F7 317 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 OR2A2Q6IF42 318 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 FAM166AQ6J272 317 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 GCNT2Q8N0V5 402 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 OR52H1Q8NGJ2 320 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 ZNF671Q8TAW3 534 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 CHPT1Q8WUD6 406 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 LYZL4Q96KX0 146 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 SOX7Q9BT81 388 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 LUZP4Q9P127 313 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 EXTL2Q9UBQ6 330 aa13.5□□□□□ -0.25
LIMS1-202ENST00000338045 A0A096LPE4 126 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 A0A1W2PPZ6 126 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 FAM25AB3EWG3 89 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 FAM25CB3EWG5 89 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 FAM25GB3EWG6 89 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 CNOT4O95628 575 aaKnown RBP13.49□□□□□ -0.25
LIMS1-202ENST00000338045 COX5BP10606 129 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 KIR2DL2P43627 348 aaPredicted RBP13.49□□□□□ -0.25
LIMS1-202ENST00000338045 SF3B4Q15427 424 aaKnown RBP eCLIP13.49□□□□□ -0.25
LIMS1-202ENST00000338045 ANKRD16Q6P6B7 361 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 FAM180AQ6UWF9 173 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 LYPD6Q86Y78 171 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 Q8NA96 180 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 CCDC54Q8NEL0 328 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 OR51A2Q8NGJ7 313 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 OR1K1Q8NGR3 316 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 OR14K1Q8NGZ2 314 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 OR5V1Q9UGF6 321 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 STEAP1Q9UHE8 339 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 PIEZO1Q92508 2521 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 RTTNQ86VV8 2226 aa13.49□□□□□ -0.25
LIMS1-202ENST00000338045 LOC390937A0A1W2PQ73 354 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 MBD3L4A6NDZ8 208 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-202ENST00000338045 MBD3L3A6NE82 208 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-202ENST00000338045 MBD3L5A6NJ08 208 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-202ENST00000338045 SLC17A2O00624 439 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 GABRA1P14867 456 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 CLDN12P56749 244 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 P2RY14Q15391 338 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 SNAI3Q3KNW1 292 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 GLT8D1Q68CQ7 371 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 ZNF585AQ6P3V2 769 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 DPPA2Q7Z7J5 298 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 NKAIN3Q8N8D7 197 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 CPEB3Q8NE35 698 aaKnown RBP13.48□□□□□ -0.25
LIMS1-202ENST00000338045 OR4M1Q8NGD0 313 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 OR5D14Q8NGL3 314 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 OR6K3Q8NGY3 331 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 MBD3L2Q8NHZ7 208 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-202ENST00000338045 BCL2L2Q92843 193 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-202ENST00000338045 OR10A2Q9H208 303 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 ETV7Q9Y603 341 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 ZNF503-AS2A6NEH8 195 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 HLA-HP01893 362 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 AZGP1P25311 298 aaKnown RBP13.48□□□□□ -0.25
LIMS1-202ENST00000338045 PTGER4P35408 488 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 TALDO1P37837 337 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 BAK1Q16611 211 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 UBE2NLQ5JXB2 153 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 SEM1Q6ZVN7 128 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 COMMD2Q86X83 199 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 SLC25A38Q96DW6 304 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 FAM71F1Q96KD3 344 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-202ENST00000338045 RNF121Q9H920 327 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 SP140LQ9H930 580 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 C14orf119Q9NWQ9 140 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 V9GYS6 101 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 DOCK7Q96N67 2140 aa13.48□□□□□ -0.25
LIMS1-202ENST00000338045 PRRC2CQ9Y520 2896 aaKnown RBP13.47□□□□□ -0.25
LIMS1-202ENST00000338045 WDR1O75083 606 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 DHRS3O75911 302 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 ARR3P36575 388 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 ID4P47928 161 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 IL18Q14116 193 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 OXA1LQ15070 435 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 Q6ZNX1 250 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 DCDC5Q6ZRR9 648 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 Q6ZT83 130 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 OR1M1Q8NGA1 313 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 SGK3Q96BR1 496 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 ABCG5Q9H222 651 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 TMEM138Q9NPI0 162 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 RHBDD3Q9Y3P4 386 aa13.47□□□□□ -0.25
LIMS1-202ENST00000338045 CSF3P09919 207 aa13.46□□□□□ -0.25
LIMS1-202ENST00000338045 IL7P13232 177 aa13.46□□□□□ -0.25
LIMS1-202ENST00000338045 ABOP16442 354 aa13.46□□□□□ -0.25
LIMS1-202ENST00000338045 ZNF20P17024 532 aa13.46□□□□□ -0.25
LIMS1-202ENST00000338045 BDKRB2P30411 391 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms