RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 BOCQ9BWV1 1114 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 CA10Q9NS85 328 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 TIMM10BQ9Y5J6 103 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 ZNF732B4DXR9 585 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 SLC17A2O00624 439 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 TBX19O60806 448 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 QDPRP09417 244 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 OR5G3P0C626 314 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 AFMIDQ63HM1 303 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 REC114Q7Z4M0 266 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 C10orf35Q96D05 121 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 S1PR3Q99500 378 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 ACER3Q9NUN7 267 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 SPATA6Q9NWH7 488 aaPredicted RBP5.03□□□□□ -1.6
PTPRB-202ENST00000334414 KIAA1456Q9P272 454 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 TRBV9A0A0B4J1U6 114 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 MPTX1A8MV57 137 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 SLC25A6P12236 298 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 BTG2P78543 158 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 GPNMBQ14956 572 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 OR2A2Q6IF42 318 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 TRILQ7L0X0 811 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 GPR32P1Q8NGA4 272 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 RXFP4Q8TDU9 374 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 SIRT3Q9NTG7 399 aaPredicted RBP5.03□□□□□ -1.6
PTPRB-202ENST00000334414 DECR2Q9NUI1 292 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 A0A1B0GTQ1 180 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 ANKRD61A6NGH8 418 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 DOK2O60496 412 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 ANGPTL5Q86XS5 388 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 CHST14Q8NCH0 376 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 PHOSPHO2Q8TCD6 241 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 WDR89Q96FK6 387 aaPredicted RBP5.03□□□□□ -1.6
PTPRB-202ENST00000334414 GPR137Q96N19 417 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 RTP3Q9BQQ7 232 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 A0A087WV62 115 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 TIMM8AO60220 97 aaPredicted RBP5.03□□□□□ -1.6
PTPRB-202ENST00000334414 RHOBP62745 196 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 ZNF789Q5FWF6 425 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 C1orf140Q5VVS0 124 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 THNSL2Q86YJ6 484 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 ZNF480Q8WV37 535 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 GALMQ96C23 342 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 PELI1Q96FA3 418 aa5.03□□□□□ -1.6
PTPRB-202ENST00000334414 NOSIPQ9Y314 301 aaKnown RBP5.03□□□□□ -1.6
PTPRB-202ENST00000334414 MRPS16Q9Y3D3 137 aaKnown RBP5.03□□□□□ -1.6
PTPRB-202ENST00000334414 TRPM3Q9HCF6 1732 aaPredicted RBP5.03□□□□□ -1.61
PTPRB-202ENST00000334414 CAMTA1Q9Y6Y1 1673 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CD3DP04234 171 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 HOXA6P31267 233 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 RRADP55042 308 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 PIGPP57054 158 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TEAD2Q15562 447 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 C18orf21Q32NC0 220 aaPredicted RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 HSF5Q4G112 596 aaPredicted RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 KHDC3LQ587J8 217 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 MED25Q71SY5 747 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR1L1Q8NH94 360 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SORBS1Q9BX66 1292 aaKnown RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR51M1Q9H341 326 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR52A4PA6NMU1 304 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 AKR7A2O43488 359 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 LRP3O75074 770 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 ANKRD34CP0C6C1 535 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 NAAAQ02083 359 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 IL24Q13007 206 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR5I1Q13606 314 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 LEXMQ3ZCV2 418 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 RNF175Q8N4F7 328 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR5AR1Q8NGP9 310 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 LIPHQ8WWY8 451 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 EID2BQ96D98 161 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 PDXPQ96GD0 296 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 GDE1Q9NZC3 331 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SLC17A4Q9Y2C5 497 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TMED7-TICAM2A0A0A6YYA0 188 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OPN1LWP04000 364 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 F2RP25116 425 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 ERVFRD-1P60508 538 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 PAX5Q02548 391 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR8G1Q15617 311 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 MRPL52Q86TS9 123 aaKnown RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 LINC00596Q86U02 117 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR2T10Q8NGZ9 312 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 KIR3DX1Q9H7L2 352 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM167BQ9NRX6 74 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR1A1Q9P1Q5 309 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TMED7Q9Y3B3 224 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR7C2O60412 319 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 STATHP02808 62 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 AWAT1Q58HT5 328 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 NECAP1Q8NC96 275 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 MUCL1Q96DR8 90 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 COMMD5Q9GZQ3 224 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 ADGRL4Q9HBW9 690 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TBX21Q9UL17 535 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 A0A1W2PN81 502 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CRYM-AS1A6NIL9 109 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF98A6NK75 572 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 HMGN4O00479 90 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms