RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 GALNT4Q8N4A0 578 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 RFLNBQ8N5W9 214 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 OR8G5Q8NG78 346 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 OR2Z1Q8NG97 314 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 OR51G2Q8NGK0 314 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 ELMOD3Q96FG2 381 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 DIRC2Q96SL1 478 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 CHODLQ9H9P2 273 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 ZNF275Q9NSD4 429 aaPredicted RBP13.13□□□□□ -0.31
TSFM-201ENST00000323833 TREM2Q9NZC2 230 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 AASSQ9UDR5 926 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 LRP12Q9Y561 859 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 GMPPBQ9Y5P6 360 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 CACNG2Q9Y698 323 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 ABCA2Q9BZC7 2435 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 CSPG4Q6UVK1 2322 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 MALRD1Q5VYJ5 2156 aa13.13□□□□□ -0.31
TSFM-201ENST00000323833 IGHV4-61A0A0C4DH41 118 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 IGHV1-69-2A0A0G2JMI3 117 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 H0YL77 283 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 RP2O75695 350 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 APOL3O95236 402 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 APOC1P02654 83 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 CD55P08174 381 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 SBK2P0C263 348 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 USF1P22415 310 aaPredicted RBP13.12□□□□□ -0.31
TSFM-201ENST00000323833 HTR1FP30939 366 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 RBMXP38159 391 aaKnown RBP13.12□□□□□ -0.31
TSFM-201ENST00000323833 CRYBB2P43320 205 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 MRPS11P82912 194 aaKnown RBP13.12□□□□□ -0.31
TSFM-201ENST00000323833 TNFAIP6P98066 277 aaPredicted RBP13.12□□□□□ -0.31
TSFM-201ENST00000323833 KRTAP1-1Q07627 177 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 LOXL1Q08397 574 aaPredicted RBP13.12□□□□□ -0.31
TSFM-201ENST00000323833 HNRNPA0Q13151 305 aaKnown RBP13.12□□□□□ -0.31
TSFM-201ENST00000323833 KCTD18Q6PI47 426 aaPredicted RBP13.12□□□□□ -0.31
TSFM-201ENST00000323833 REPIN1Q9BWE0 567 aaKnown RBP13.12□□□□□ -0.31
TSFM-201ENST00000323833 HAO2Q9NYQ3 351 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 ZNF319Q9P2F9 582 aa13.12□□□□□ -0.31
TSFM-201ENST00000323833 WARS2Q9UGM6 360 aaKnown RBP13.12□□□□□ -0.31
TSFM-201ENST00000323833 TLN2Q9Y4G6 2542 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 DLGAP1O14490 977 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 MAGEB4O15481 346 aaPredicted RBP13.11□□□□□ -0.31
TSFM-201ENST00000323833 MLNRO43193 412 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 ENTPD6O75354 484 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 SELEP16581 610 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 PEX2P28328 305 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 CXCR4P61073 352 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 ELF3P78545 371 aaPredicted RBP13.11□□□□□ -0.31
TSFM-201ENST00000323833 ZNF540Q8NDQ6 660 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 OR10AD1Q8NGE0 317 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 OR13G1Q8NGZ3 307 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 SPRYD4Q8WW59 207 aaPredicted RBP13.11□□□□□ -0.31
TSFM-201ENST00000323833 ITLN1Q8WWA0 313 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 TRUB1Q8WWH5 349 aaKnown RBP13.11□□□□□ -0.31
TSFM-201ENST00000323833 SGK3Q96BR1 496 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 PGAM5Q96HS1 289 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 OR8B4Q96RC9 309 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 TBX5Q99593 518 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 SLC30A2Q9BRI3 323 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 EGLN1Q9GZT9 426 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 FAM118AQ9NWS6 357 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 CLN6Q9NWW5 311 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 TMEM14AQ9Y6G1 99 aa13.11□□□□□ -0.31
TSFM-201ENST00000323833 LOC100130705A0A1B0GUX0 176 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 LRP5LA4QPB2 252 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 GGT3PA6NGU5 568 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 CD300LBA8K4G0 201 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 PPIHO43447 177 aaKnown RBP13.1□□□□□ -0.31
TSFM-201ENST00000323833 XRCC2O43543 280 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 HLA-DPB1P04440 258 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 HEXAP06865 529 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 TNFSF4P23510 183 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 GPR6P46095 362 aaPredicted RBP13.1□□□□□ -0.31
TSFM-201ENST00000323833 SNRPGP62308 76 aaKnown RBP13.1□□□□□ -0.31
TSFM-201ENST00000323833 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 TMEM249Q2WGJ8 235 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 GFOD2Q3B7J2 385 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 ZNF322Q6U7Q0 402 aaPredicted RBP13.1□□□□□ -0.31
TSFM-201ENST00000323833 ASB17Q8WXJ9 295 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 CCL17Q92583 94 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 RFKQ969G6 155 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 SPSB4Q96A44 273 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 REEP6Q96HR9 211 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 OR2V2Q96R30 315 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 APOL4Q9BPW4 351 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 MROQ9BYG7 248 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 OR10A2Q9H208 303 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 SP140LQ9H930 580 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 TMEM100Q9NV29 134 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 SMPD3Q9NY59 655 aaPredicted RBP13.1□□□□□ -0.31
TSFM-201ENST00000323833 IKZF2Q9UKS7 526 aa13.1□□□□□ -0.31
TSFM-201ENST00000323833 ZNF670-ZNF695F2Z2N8 137 aa13.09□□□□□ -0.31
TSFM-201ENST00000323833 F5H5P2 479 aa13.09□□□□□ -0.31
TSFM-201ENST00000323833 GABRB1P18505 474 aa13.09□□□□□ -0.31
TSFM-201ENST00000323833 TMEM33P57088 247 aa13.09□□□□□ -0.31
TSFM-201ENST00000323833 PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
TSFM-201ENST00000323833 ROM1Q03395 351 aa13.09□□□□□ -0.31
TSFM-201ENST00000323833 POU4F2Q12837 409 aa13.09□□□□□ -0.31
TSFM-201ENST00000323833 OCLNQ16625 522 aa13.09□□□□□ -0.31
TSFM-201ENST00000323833 HFEQ30201 348 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms