RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 IL7P13232 177 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 CELP19835 753 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 RGS6P49758 472 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 PRKXP51817 358 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 PLP2Q04941 152 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 CDK5R1Q15078 307 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 SSX1Q16384 188 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 LIPKQ5VXJ0 399 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 CCDC28AQ8IWP9 274 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 CPEB3Q8NE35 698 aaKnown RBP14.04□□□□□ -0.16
TUBB3-201ENST00000315491 HSD17B8Q92506 261 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 SPTSSAQ969W0 71 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 S100PBPQ96BU1 408 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 KCNN3Q9UGI6 736 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 ATPIF1Q9UII2 106 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 AMDHD2Q9Y303 409 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 SHOXO15266 292 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 SRSF10O75494 262 aaKnown RBP14.04□□□□□ -0.16
TUBB3-201ENST00000315491 PNPP00491 289 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 COX5BP10606 129 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 CRYGSP22914 178 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 SOX6P35712 828 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 NANOS3P60323 173 aaKnown RBP14.04□□□□□ -0.16
TUBB3-201ENST00000315491 PSMA6P60900 246 aaKnown RBP14.04□□□□□ -0.16
TUBB3-201ENST00000315491 MFGE8Q08431 387 aaPredicted RBP14.04□□□□□ -0.16
TUBB3-201ENST00000315491 ALKBH1Q13686 389 aaKnown RBP14.04□□□□□ -0.16
TUBB3-201ENST00000315491 TIMM23BQ5SRD1 257 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 FDX2Q6P4F2 183 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 XKRXQ6PP77 449 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 ARL9Q6T311 187 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 PHC2Q8IXK0 858 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 ELMOD2Q8IZ81 293 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 ZNF283Q8N7M2 679 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 SLC7A6Q92536 515 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 MARVELD3Q96A59 401 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 ACTR6Q9GZN1 396 aa14.04□□□□□ -0.16
TUBB3-201ENST00000315491 NCOA6Q14686 2063 aaPredicted RBP14.03□□□□□ -0.16
TUBB3-201ENST00000315491 IQCMA0A1B0GVH7 501 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 TMEM269A0A1B0GVZ9 245 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 F5H5K5 113 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 C16orf97H3BN30 126 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 DBHP09172 617 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 PRKACBP22694 351 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 OTX1P32242 354 aaPredicted RBP14.03□□□□□ -0.16
TUBB3-201ENST00000315491 CX3CR1P49238 355 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 MMP16P51512 607 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 RSPO1Q2MKA7 263 aaPredicted RBP14.03□□□□□ -0.16
TUBB3-201ENST00000315491 KRTAP27-1Q3LI81 207 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 DMKNQ6E0U4 476 aaPredicted RBP14.03□□□□□ -0.16
TUBB3-201ENST00000315491 IDO2Q6ZQW0 420 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 OR2G2Q8NGZ5 317 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 RPS4Y2Q8TD47 263 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 SMIM19Q96E16 107 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 C4orf45Q96LM5 186 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 ZNF75AQ96N20 296 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 FAM206AQ9NX38 181 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 SLC25A15Q9Y619 301 aa14.03□□□□□ -0.16
TUBB3-201ENST00000315491 TRBV2A0A0J9YWF9 115 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 ZSCAN5BA6NJL1 495 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 M0R135 149 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 PLPP2O43688 288 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 SSX4O60224 188 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 APOC1P02654 83 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 CBR1P16152 277 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 APEX1P27695 318 aaKnown RBP14.02□□□□□ -0.16
TUBB3-201ENST00000315491 CCKARP32238 428 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 OR3A3P47888 321 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 GDI2P50395 445 aaKnown RBP14.02□□□□□ -0.16
TUBB3-201ENST00000315491 AP2S1P53680 142 aaPredicted RBP14.02□□□□□ -0.16
TUBB3-201ENST00000315491 SLC3A1Q07837 685 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 FBXL19-AS1Q494R0 122 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 WDR38Q5JTN6 314 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 CATSPERDQ86XM0 798 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 ZNF584Q8IVC4 421 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 SLC38A6Q8IZM9 456 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 PRSS35Q8N3Z0 413 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 CA5BP1Q8WTZ4 195 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 ZNF799Q96GE5 643 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 USB1Q9BQ65 265 aaKnown RBP14.02□□□□□ -0.16
TUBB3-201ENST00000315491 SLC30A2Q9BRI3 323 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 TRAF4Q9BUZ4 470 aaPredicted RBP14.02□□□□□ -0.16
TUBB3-201ENST00000315491 OR10A4Q9H209 315 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 BRD7Q9NPI1 651 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 NDUFB11Q9NX14 153 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 FRRS1LQ9P0K9 344 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 OR52A1Q9UKL2 312 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 GTF2A1LQ9UNN4 478 aa14.02□□□□□ -0.16
TUBB3-201ENST00000315491 MEIOCA2RUB1 952 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 AGFG2O95081 481 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 SERPINA5P05154 406 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 CD1AP06126 327 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 STOMP27105 288 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 CCR9P51686 369 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 ZNF121P58317 390 aaPredicted RBP14.01□□□□□ -0.17
TUBB3-201ENST00000315491 ZFAND1Q8TCF1 268 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 PGLYRP3Q96LB9 341 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 DMRTB1Q96MA1 342 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 MOB1AQ9H8S9 216 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 G6PC2Q9NQR9 355 aa14.01□□□□□ -0.17
TUBB3-201ENST00000315491 PLSCR3Q9NRY6 295 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms