RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 GUCA1AP43080 201 aaPredicted RBP5.06□□□□□ -1.6
SSX3-201ENST00000298396 ETV1P50549 477 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 NR1H2P55055 460 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 CXCR4P61073 352 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 ROM1Q03395 351 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 MFGE8Q08431 387 aaPredicted RBP5.06□□□□□ -1.6
SSX3-201ENST00000298396 TMED1Q13445 227 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 ADIPOQQ15848 244 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 MST1LQ2TV78 715 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 SNAI3Q3KNW1 292 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 ALKBH6Q3KRA9 238 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 C6orf141Q5SZD1 244 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 C11orf71Q6IPW1 123 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 TMEM108Q6UXF1 575 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 LRRN1Q6UXK5 716 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 SSX8Q7RTT4 187 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 LRP11Q86VZ4 500 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 ZNF485Q8NCK3 441 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 SETD9Q8NE22 299 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 NUP37Q8NFH4 326 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 OR10H4Q8NGA5 316 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 OR2AJ1Q8NGZ0 328 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 TMEM171Q8WVE6 324 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 GTF3AQ92664 365 aaKnown RBP5.06□□□□□ -1.6
SSX3-201ENST00000298396 AKAP1Q92667 903 aaKnown RBP eCLIP5.06□□□□□ -1.6
SSX3-201ENST00000298396 OR8B4Q96RC9 309 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 ATF6BQ99941 703 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 SOX7Q9BT81 388 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 JAM3Q9BX67 310 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 C1QTNF5Q9BXJ0 243 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 KCNN2Q9H2S1 579 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 C1orf198Q9H425 327 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 ESRP2Q9H6T0 727 aaKnown RBP5.06□□□□□ -1.6
SSX3-201ENST00000298396 FGF20Q9NP95 211 aaPredicted RBP5.06□□□□□ -1.6
SSX3-201ENST00000298396 PLCXD1Q9NUJ7 323 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 H2AFY2Q9P0M6 372 aaPredicted RBP5.06□□□□□ -1.6
SSX3-201ENST00000298396 CLEC2DQ9UHP7 191 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 PSORS1C1Q9UIG5 152 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 LAMP5Q9UJQ1 280 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.06□□□□□ -1.6
SSX3-201ENST00000298396 STARD10Q9Y365 291 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 X6R8D5 127 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 DSCAML1Q8TD84 2053 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 WNK2Q9Y3S1 2297 aa5.06□□□□□ -1.6
SSX3-201ENST00000298396 TLN2Q9Y4G6 2542 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CREBBPQ92793 2442 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 OTOGQ6ZRI0 2925 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 IQCMA0A1B0GVH7 501 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 F5H5K5 113 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 M0R135 149 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CASKO14936 926 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 FAM20BO75063 409 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CLPTM1O96005 669 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 LALBAP00709 142 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CRYAAP02489 173 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 OR2T7P0C7T2 308 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 PIPP12273 146 aaPredicted RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 ZNF250P15622 560 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CCNOP22674 350 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 PAX7P23759 505 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 C21orf33P30042 268 aaPredicted RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 SSTR2P30874 369 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 APLNRP35414 380 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 KIR3DL2P43630 455 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 HSPA13P48723 471 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CX3CR1P49238 355 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 GDI2P50395 445 aaKnown RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 PRKXP51817 358 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 UCP2P55851 309 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 OR12D2P58182 307 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 ZNF121P58317 390 aaPredicted RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 SLC35A2P78381 396 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 GALK2Q01415 458 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 PLP2Q04941 152 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 RAB40BQ12829 278 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 ECH1Q13011 328 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 SNTB2Q13425 540 aaKnown RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 TNK1Q13470 666 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 IRF3Q14653 427 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 HLXQ14774 488 aaPredicted RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 KIR3DS1Q14943 382 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 TBC1D28Q2M2D7 210 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CDONQ4KMG0 1287 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 TP53I3Q53FA7 332 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 SPATA46Q5T0L3 261 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 SLC22A25Q6T423 547 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 ZNF322Q6U7Q0 402 aaPredicted RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 LHFPL3Q86UP9 236 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 DTX2Q86UW9 622 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 TMEM200AQ86VY9 491 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 ZNF679Q8IYX0 411 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 IL17RDQ8NFM7 739 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 BPIFB6Q8NFQ5 453 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 OR2T27Q8NH04 317 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 OR2AE1Q8NHA4 323 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 THEM6Q8WUY1 208 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 RFKQ969G6 155 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 ZNF799Q96GE5 643 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 MARS2Q96GW9 593 aaKnown RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 RADILQ96JH8 1075 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms