RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 CBR4Q8N4T8 237 aa21.31■■□□□ 1
PDF-201ENST00000288022 ITLN1Q8WWA0 313 aa21.31■■□□□ 1
PDF-201ENST00000288022 TIMD4Q96H15 378 aa21.31■■□□□ 1
PDF-201ENST00000288022 SLC30A2Q9BRI3 323 aa21.31■■□□□ 1
PDF-201ENST00000288022 BRD7Q9NPI1 651 aa21.31■■□□□ 1
PDF-201ENST00000288022 TMEM100Q9NV29 134 aa21.31■■□□□ 1
PDF-201ENST00000288022 USE1Q9NZ43 259 aa21.31■■□□□ 1
PDF-201ENST00000288022 IL19Q9UHD0 177 aa21.31■■□□□ 1
PDF-201ENST00000288022 ZANQ9Y493 2812 aa21.31■■□□□ 1
PDF-201ENST00000288022 LOC100289279A0A1B0GTE1 492 aa21.3■■□□□ 1
PDF-201ENST00000288022 SLC22A31A6NKX4 558 aa21.3■■□□□ 1
PDF-201ENST00000288022 XRCC2O43543 280 aa21.3■■□□□ 1
PDF-201ENST00000288022 RAD23AP54725 363 aa21.3■■□□□ 1
PDF-201ENST00000288022 ZNF121P58317 390 aaPredicted RBP21.3■■□□□ 1
PDF-201ENST00000288022 EFNB1P98172 346 aa21.3■■□□□ 1
PDF-201ENST00000288022 SLC3A1Q07837 685 aa21.3■■□□□ 1
PDF-201ENST00000288022 AADACL4Q5VUY2 407 aa21.3■■□□□ 1
PDF-201ENST00000288022 LRRN1Q6UXK5 716 aa21.3■■□□□ 1
PDF-201ENST00000288022 FAM57BQ71RH2 274 aa21.3■■□□□ 1
PDF-201ENST00000288022 GID4Q8IVV7 300 aa21.3■■□□□ 1
PDF-201ENST00000288022 HPS1Q92902 700 aa21.3■■□□□ 1
PDF-201ENST00000288022 RAB1CQ92928 201 aa21.3■■□□□ 1
PDF-201ENST00000288022 OR2V2Q96R30 315 aa21.3■■□□□ 1
PDF-201ENST00000288022 CNN2Q99439 309 aaKnown RBP21.3■■□□□ 1
PDF-201ENST00000288022 YLPM1P49750 1951 aaKnown RBP21.3■■□□□ 1
PDF-201ENST00000288022 H0YL77 283 aa21.29■■□□□ 1
PDF-201ENST00000288022 BAG2O95816 211 aa21.29■■□□□ 1
PDF-201ENST00000288022 ALOX5APP20292 161 aa21.29■■□□□ 1
PDF-201ENST00000288022 ALDH3A2P51648 485 aa21.29■■□□□ 1
PDF-201ENST00000288022 CDC42P60953 191 aa21.29■■□□□ 1
PDF-201ENST00000288022 TIGD6Q17RP2 521 aa21.29■■□□□ 1
PDF-201ENST00000288022 ZIK1Q3SY52 487 aaPredicted RBP21.29■■□□□ 1
PDF-201ENST00000288022 KRT77Q7Z794 578 aa21.29■■□□□ 1
PDF-201ENST00000288022 PQLC1Q8N2U9 271 aa21.29■■□□□ 1
PDF-201ENST00000288022 CLDND2Q8NHS1 167 aa21.29■■□□□ 1
PDF-201ENST00000288022 MSI2Q96DH6 328 aaKnown RBP21.29■■□□□ 1
PDF-201ENST00000288022 C9orf16Q9BUW7 83 aa21.29■■□□□ 1
PDF-201ENST00000288022 REPIN1Q9BWE0 567 aaKnown RBP21.29■■□□□ 1
PDF-201ENST00000288022 CSPG4Q6UVK1 2322 aa21.29■■□□□ 1
PDF-201ENST00000288022 CD300LBA8K4G0 201 aa21.28■■□□□ 1
PDF-201ENST00000288022 WNT9BO14905 357 aa21.28■■□□□ 1
PDF-201ENST00000288022 MLNRO43193 412 aa21.28■■□□□ 1
PDF-201ENST00000288022 HLA-DPB1P04440 258 aa21.28■■□□□ 1
PDF-201ENST00000288022 HOXB4P17483 251 aaPredicted RBP21.28■■□□□ 1
PDF-201ENST00000288022 GFOD2Q3B7J2 385 aa21.28■■□□□ 1
PDF-201ENST00000288022 KCTD18Q6PI47 426 aaPredicted RBP21.28■■□□□ 1
PDF-201ENST00000288022 PEG10Q86TG7 708 aaKnown RBP21.28■■□□□ 1
PDF-201ENST00000288022 PGAM5Q96HS1 289 aa21.28■■□□□ 1
PDF-201ENST00000288022 SOX7Q9BT81 388 aa21.28■■□□□ 1
PDF-201ENST00000288022 OPA3Q9H6K4 179 aa21.28■■□□□ 1
PDF-201ENST00000288022 IMPAD1Q9NX62 359 aa21.28■■□□□ 1
PDF-201ENST00000288022 PPP1R3CQ9UQK1 317 aa21.28■■□□□ 1
PDF-201ENST00000288022 WIPI2Q9Y4P8 454 aa21.28■■□□□ 1
PDF-201ENST00000288022 TMEM14AQ9Y6G1 99 aa21.28■■□□□ 1
PDF-201ENST00000288022 F5H5P2 479 aa21.27■■□□□ 1
PDF-201ENST00000288022 TGFAP01135 160 aa21.27■■□□□ 1
PDF-201ENST00000288022 SRP9P49458 86 aaKnown RBP21.27■■□□□ 1
PDF-201ENST00000288022 FAM166AQ6J272 317 aa21.27■■□□□ 1
PDF-201ENST00000288022 OR52H1Q8NGJ2 320 aa21.27■■□□□ 1
PDF-201ENST00000288022 OR8J1Q8NGP2 316 aa21.27■■□□□ 1
PDF-201ENST00000288022 FAM81AQ8TBF8 368 aa21.27■■□□□ 1
PDF-201ENST00000288022 MEGF10Q96KG7 1140 aa21.27■■□□□ 1
PDF-201ENST00000288022 TTTY10Q9BZA0 68 aa21.27■■□□□ 1
PDF-201ENST00000288022 OR10A2Q9H208 303 aa21.27■■□□□ 1
PDF-201ENST00000288022 LRP12Q9Y561 859 aa21.27■■□□□ 1
PDF-201ENST00000288022 TANC2Q9HCD6 1990 aa21.27■□□□□ 0.99
PDF-201ENST00000288022 ABCA1O95477 2261 aa21.26■□□□□ 0.99
PDF-201ENST00000288022 IGHV3-64DA0A0J9YX35 117 aa21.26■□□□□ 0.99
PDF-201ENST00000288022 ISPDA4D126 451 aa21.26■□□□□ 0.99
PDF-201ENST00000288022 PSMD9O00233 223 aa21.26■□□□□ 0.99
PDF-201ENST00000288022 HNRNPA0Q13151 305 aaKnown RBP21.26■□□□□ 0.99
PDF-201ENST00000288022 EME1Q96AY2 570 aa21.26■□□□□ 0.99
PDF-201ENST00000288022 REEP6Q96HR9 211 aa21.26■□□□□ 0.99
PDF-201ENST00000288022 NIPAL2Q9H841 368 aa21.26■□□□□ 0.99
PDF-201ENST00000288022 TMEM106BQ9NUM4 274 aa21.26■□□□□ 0.99
PDF-201ENST00000288022 HIVEP2P31629 2446 aa21.26■□□□□ 0.99
PDF-201ENST00000288022 CA6P23280 308 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 PSMA6P60900 246 aaKnown RBP21.25■□□□□ 0.99
PDF-201ENST00000288022 OR8G1Q15617 311 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 ZBTB49Q6ZSB9 765 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 PRSS45Q7RTY3 260 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 SLC35F2Q8IXU6 374 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 LINC01356Q8N9X3 169 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 OR56B2PQ8NGI1 322 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 ASB17Q8WXJ9 295 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 SPSB4Q96A44 273 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 SGK3Q96BR1 496 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 POM121Q96HA1 1249 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 MROQ9BYG7 248 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 SLC22A4Q9H015 551 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 ADGRL4Q9HBW9 690 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 DCAF16Q9NXF7 216 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 WARS2Q9UGM6 360 aaKnown RBP21.25■□□□□ 0.99
PDF-201ENST00000288022 IKZF2Q9UKS7 526 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 KCNS2Q9ULS6 477 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 COPS3Q9UNS2 423 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 NOP16Q9Y3C1 178 aaKnown RBP21.25■□□□□ 0.99
PDF-201ENST00000288022 TLN2Q9Y4G6 2542 aa21.25■□□□□ 0.99
PDF-201ENST00000288022 SETD2Q9BYW2 2564 aaPredicted RBP21.24■□□□□ 0.99
PDF-201ENST00000288022 LMX1BO60663 402 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms