RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 GZMHP20718 246 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 CEBPGP53567 150 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 SHHQ15465 462 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 TDRG1Q3Y452 100 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 MEX3BQ6ZN04 569 aaKnown RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 CYB561A3Q8NBI2 242 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 OR5AK2Q8NH90 309 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 DIO2Q92813 273 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 SUSD3Q96L08 255 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF430Q9H8G1 570 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 NAGKQ9UJ70 344 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 MRPS2Q9Y399 296 aaKnown RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 MKI67P46013 3256 aaKnown RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 A0A0D9SEW6 157 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 LEFTY1O75610 366 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 RPP14O95059 124 aaKnown RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 CD1AP06126 327 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 NBEAP1P0C6P0 100 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 NR2F1P10589 423 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 FOLR1P15328 257 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 OR10J1P30954 320 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 CAMLGP49069 296 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 CCR5P51681 352 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 RPL19P84098 196 aaKnown RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 REEP5Q00765 189 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ST3GAL3Q11203 375 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 RAB32Q13637 225 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 TMEM241Q24JQ0 296 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 METRNLQ641Q3 311 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 FBXL22Q6P050 247 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 GLB1LQ6UWU2 654 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 C16orf59Q7L2K0 433 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 LINC01551Q86U37 167 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ADIPOR2Q86V24 386 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF429Q86V71 674 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 STPG4Q8N801 248 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 TMEM255BQ8WV15 326 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 FGF13Q92913 245 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 CAPNS2Q96L46 248 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 C1QTNF2Q9BXJ5 285 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 KCNK15Q9H427 330 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 HSF4Q9ULV5 492 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 SIGLEC7Q9Y286 467 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 NTNG1Q9Y2I2 539 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF281Q9Y2X9 895 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 HEATR5AQ86XA9 2040 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 FTCDNL1E5RQL4 147 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ATXN7O15265 892 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-201ENST00000274071 GPRIN2O60269 458 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 SLCO2B1O94956 709 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 EOMESO95936 686 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 CYB5AP00167 134 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 MAS1P04201 325 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 F3P13726 295 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 SLC2A5P22732 501 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 PDLIM4P50479 330 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 SLC35A1P78382 337 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 P2RY6Q15077 328 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 TMEM108Q6UXF1 575 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 WDFY1Q8IWB7 410 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 SYS1Q8N2H4 156 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 OR51A2Q8NGJ7 313 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 OR5L2Q8NGL0 311 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 STT3BQ8TCJ2 826 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ASB11Q8WXH4 323 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 C20orf144Q9BQM9 153 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 LUZP4Q9P127 313 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ICKQ9UPZ9 632 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 CLDN16Q9Y5I7 305 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 ARID1AO14497 2285 aa8.25□□□□□ -1.09
PDGFC-201ENST00000274071 DOCK4Q8N1I0 1966 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 THSD7BQ9C0I4 1608 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 A0A1B0GW64 132 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 TSPAN11A1L157 253 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 THY1P04216 161 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 CTXN2P0C2S0 81 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 CCKARP32238 428 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 PPP1CCP36873 323 aaKnown RBP8.24□□□□□ -1.09
PDGFC-201ENST00000274071 CAPZBP47756 277 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 OR3A2P47893 321 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 LSSP48449 732 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 NANOS3P60323 173 aaKnown RBP8.24□□□□□ -1.09
PDGFC-201ENST00000274071 PRPS1P60891 318 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 GAS6Q14393 721 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 CLLU1OSQ5K130 101 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 APCDD1LQ8NCL9 501 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 KREMEN2Q8NCW0 462 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 TBX15Q96SF7 602 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 PCGF1Q9BSM1 259 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 SMIM3Q9BZL3 60 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 OR10A5Q9H207 317 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 CYP8B1Q9UNU6 501 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 SLC7A11Q9UPY5 501 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 FCF1Q9Y324 198 aaKnown RBP8.24□□□□□ -1.09
PDGFC-201ENST00000274071 RNF115Q9Y4L5 304 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 ZNF860A6NHJ4 632 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 GAPDHP04406 335 aaKnown RBP8.24□□□□□ -1.09
PDGFC-201ENST00000274071 KLK1P06870 262 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 OR4Q2P0C623 313 aa8.24□□□□□ -1.09
PDGFC-201ENST00000274071 SERPINA2P20848 420 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 311.1 ms