RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 FAM206AQ9NX38 181 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 TMEM269A0A1B0GVZ9 245 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 ZSCAN5BA6NJL1 495 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 SRSF10O75494 262 aaKnown RBP10.89□□□□□ -0.67
SS18-202ENST00000269138 RPP14O95059 124 aaKnown RBP10.89□□□□□ -0.67
SS18-202ENST00000269138 APOC1P02654 83 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 MMP15P51511 669 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 RAB40BQ12829 278 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 MALLQ13021 153 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 TESK1Q15569 626 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 TP53I3Q53FA7 332 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 Q6ZR03 302 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 LHFPL3Q86UP9 236 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 YIPF7Q8N8F6 280 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 OR8B12Q8NGG6 310 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 SNX33Q8WV41 574 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 ZNF649Q9BS31 505 aa10.89□□□□□ -0.67
SS18-202ENST00000269138 REPIN1Q9BWE0 567 aaKnown RBP10.89□□□□□ -0.67
SS18-202ENST00000269138 ARID1AO14497 2285 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 MYO9AB2RTY4 2548 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 MAST4O15021 2626 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 METTL15A6NJ78 407 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 XPNPEP2O43895 674 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 SSX4O60224 188 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 FADS2O95864 444 aaKnown RBP10.88□□□□□ -0.67
SS18-202ENST00000269138 IGHA1P01876 353 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 KRT8P05787 483 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 DCTDP32321 178 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 MOGQ16653 247 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 KLHL22Q53GT1 634 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 PGAP1Q75T13 922 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 MRPL21Q7Z2W9 205 aaKnown RBP10.88□□□□□ -0.67
SS18-202ENST00000269138 BHLHE23Q8NDY6 225 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 OR52H1Q8NGJ2 320 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 GGHQ92820 318 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 RNF166Q96A37 237 aaPredicted RBP10.88□□□□□ -0.67
SS18-202ENST00000269138 SPSB4Q96A44 273 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 SIGLEC11Q96RL6 698 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 SOX7Q9BT81 388 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 OR10A2Q9H208 303 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 MS4A5Q9H3V2 200 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 FGF20Q9NP95 211 aaPredicted RBP10.88□□□□□ -0.67
SS18-202ENST00000269138 GPR160Q9UJ42 338 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 GNG8Q9UK08 70 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 PCDHGB1Q9Y5G3 927 aa10.88□□□□□ -0.67
SS18-202ENST00000269138 AKAP9Q99996 3911 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 C17orf100A8MU93 164 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 XRCC2O43543 280 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 SPRY3O43610 288 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 SULT1C4O75897 302 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 NCR1O76036 304 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 F12P00748 615 aaPredicted RBP10.87□□□□□ -0.67
SS18-202ENST00000269138 IGHV1-46P01743 117 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 MYF6P23409 242 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 PSMB10P40306 273 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 MAGEB1P43366 347 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 ZNF81P51508 661 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 MMP16P51512 607 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 EFNA4P52798 201 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 OR12D2P58182 307 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 ACTC1P68032 377 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 ACTA1P68133 377 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 MVKQ03426 396 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 TSTQ16762 297 aaKnown RBP10.87□□□□□ -0.67
SS18-202ENST00000269138 TIGD6Q17RP2 521 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 ZNF829Q3KNS6 432 aaPredicted RBP10.87□□□□□ -0.67
SS18-202ENST00000269138 CDONQ4KMG0 1287 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 SPRNQ5BIV9 151 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 Q5PR19 223 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 LIPNQ5VXI9 398 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 WFDC11Q8NEX6 87 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 BPIFB6Q8NFQ5 453 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 REEP6Q96HR9 211 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 LYZL4Q96KX0 146 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 ANKRD60Q9BZ19 345 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 PBOV1Q9GZY1 135 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 RAB1BQ9H0U4 201 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 SP140LQ9H930 580 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 G6PC2Q9NQR9 355 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 ACOXLQ9NUZ1 547 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 ERVK13-1Q9NX77 482 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 FBXO9Q9UK97 447 aaPredicted RBP10.87□□□□□ -0.67
SS18-202ENST00000269138 GTF2A1LQ9UNN4 478 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 SLC22A13Q9Y226 551 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 PCDHGB5Q9Y5G0 923 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 R4GMQ9 66 aa10.87□□□□□ -0.67
SS18-202ENST00000269138 PLSCR5A0PG75 271 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 GGT3PA6NGU5 568 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 ACOD1A6NK06 481 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 CD300LBA8K4G0 201 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 IQCF6A8MYZ5 107 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 LOC110117498-PIK3R3F6TDL0 507 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 J3QLW9 94 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 FAM20BO75063 409 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 HPXP02790 462 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 LIMS3P0CW19 117 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 LIMS4P0CW20 117 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 ZNF19P17023 458 aa10.86□□□□□ -0.67
SS18-202ENST00000269138 HSPA13P48723 471 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms