RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CKAP5Q14008 2032 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 NKX6-3A6NJ46 265 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 BHLHE40O14503 412 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 TMEM127O75204 238 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 MED6O75586 246 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 LUMP51884 338 aaPredicted RBP13.86□□□□□ -0.19
TIMP3-201ENST00000266085 PEA15Q15121 130 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 ZNF766Q5HY98 468 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 THSD4Q6ZMP0 1018 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 LHFPL2Q6ZUX7 228 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 SLC22A18ASQ8N1D0 253 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 PLPP5Q8NEB5 264 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 OR10J5Q8NHC4 309 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 RBMXL1Q96E39 390 aaKnown RBP13.86□□□□□ -0.19
TIMP3-201ENST00000266085 PLEKHF2Q9H8W4 249 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 BOLA1Q9Y3E2 137 aa13.86□□□□□ -0.19
TIMP3-201ENST00000266085 CHRNB4P30926 498 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 S100A11P31949 105 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 FMODQ06828 376 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 FZD5Q13467 585 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 SHEQ5VZ18 495 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 XAF1Q6GPH4 301 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 ANKRD16Q6P6B7 361 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 DPPA2Q7Z7J5 298 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 VASH2Q86V25 355 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 PELI1Q96FA3 418 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 IGHV5-10-1A0A0J9YXX1 117 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 OR6C68A6NDL8 312 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 DYRK1AQ13627 763 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 NUBPLQ8TB37 319 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 ZNF768Q9H5H4 540 aaKnown RBP13.85□□□□□ -0.19
TIMP3-201ENST00000266085 UCK1Q9HA47 277 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 LRP12Q9Y561 859 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 CLDN1O95832 211 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 CSF3P09919 207 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 B3GNTL1Q67FW5 361 aaPredicted RBP13.85□□□□□ -0.19
TIMP3-201ENST00000266085 RHOUQ7L0Q8 258 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 PRSS42Q7Z5A4 293 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 OR6K3Q8NGY3 331 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 OIT3Q8WWZ8 545 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 RASL10BQ96S79 203 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 POFUT1Q9H488 388 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 TAS2R5Q9NYW4 299 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 TCFL5Q9UL49 500 aa13.85□□□□□ -0.19
TIMP3-201ENST00000266085 TEX51A0A1B0GUA7 166 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 CDC42EP2O14613 210 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 SHOXO15266 292 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 ZXDAP98168 799 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 INSM1Q01101 510 aaPredicted RBP13.84□□□□□ -0.19
TIMP3-201ENST00000266085 SLC25A26Q70HW3 274 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 TMEM200AQ86VY9 491 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 PCYT1BQ9Y5K3 369 aaPredicted RBP13.84□□□□□ -0.19
TIMP3-201ENST00000266085 OPRM1P35372 400 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 FABP6P51161 128 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 TAS2R30P59541 319 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 CD226Q15762 336 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 SLC51BQ86UW2 128 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 GALNT16Q8N428 558 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 PP6455Q8WZ26 134 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 EXOSC3Q9NQT5 275 aaKnown RBP13.84□□□□□ -0.19
TIMP3-201ENST00000266085 GHRLQ9UBU3 117 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 WDR90Q96KV7 1748 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 SLC17A2O00624 439 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 FOXS1O43638 330 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 IFNA10P01566 189 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 KITLGP21583 273 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 RFX2P48378 723 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 CT55Q8WUE5 264 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 ARPC5LQ9BPX5 153 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 C12orf10Q9HB07 376 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 DDOSTP39656 456 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 SLC25A35Q3KQZ1 300 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 WFDC8Q8IUA0 241 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 OR51H1Q8NH63 302 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 MOGAT1Q96PD6 335 aa13.84□□□□□ -0.19
TIMP3-201ENST00000266085 LRP5LA4QPB2 252 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 ZNF891A8MT65 544 aaPredicted RBP13.83□□□□□ -0.19
TIMP3-201ENST00000266085 GLAP06280 429 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 GLI4P10075 376 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 FAHP16930 419 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 NFYBP25208 207 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 ZNF718Q3SXZ3 478 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 C8orf82Q6P1X6 216 aaPredicted RBP13.83□□□□□ -0.19
TIMP3-201ENST00000266085 ZAR1Q86SH2 424 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 TMEM52Q8NDY8 209 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 OR4A16Q8NH70 328 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 FAM234AQ9H0X4 552 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 AKIP1Q9NQ31 210 aa13.83□□□□□ -0.19
TIMP3-201ENST00000266085 CACNA1HO95180 2353 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
TIMP3-201ENST00000266085 SUMF1Q8NBK3 374 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 FYTTD1Q96QD9 318 aaKnown RBP13.83□□□□□ -0.2
TIMP3-201ENST00000266085 DDOQ99489 341 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 NBASA2RRP1 2371 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 SULT1C2O00338 296 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 SDCBPO00560 298 aaPredicted RBP13.83□□□□□ -0.2
TIMP3-201ENST00000266085 ZFPL1O95159 310 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 RPA2P15927 270 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 NDUFB7P17568 137 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 ATPAF1Q5TC12 328 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms