RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 COPS4Q9BT78 406 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 REPIN1Q9BWE0 567 aaKnown RBP13.51□□□□□ -0.25
USE1-201ENST00000263897 C7orf69Q9H7B7 122 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 MED20Q9H944 212 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 TMEM165Q9HC07 324 aa13.51□□□□□ -0.25
USE1-201ENST00000263897 POLR3KQ9Y2Y1 108 aaPredicted RBP13.51□□□□□ -0.25
USE1-201ENST00000263897 IGHV3-64DA0A0J9YX35 117 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 C5orf63A6NC05 138 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 FAM183AA6NL82 134 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 CD300LBA8K4G0 201 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 WNT2P09544 360 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 ANOS1P23352 680 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 PMELP40967 661 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 GATA4P43694 442 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 FLOT2Q14254 428 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 GINS1Q14691 196 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 C1QL2Q7Z5L3 287 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 SPATA24Q86W54 205 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 PAPD5Q8NDF8 572 aaKnown RBP13.5□□□□□ -0.25
USE1-201ENST00000263897 NANPQ8TBE9 248 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 SLC22A4Q9H015 551 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 MARCH7Q9H992 704 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 OPN4Q9UHM6 478 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 POMPQ9Y244 141 aa13.5□□□□□ -0.25
USE1-201ENST00000263897 TCRBV3S1A0A5B6 114 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 LRRC30A6NM36 301 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 ZNF878C9JN71 531 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 F5H0A9 414 aaPredicted RBP13.49□□□□□ -0.25
USE1-201ENST00000263897 TRAPPC2LH3BP13 241 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 DNAJC8O75937 253 aaPredicted RBP13.49□□□□□ -0.25
USE1-201ENST00000263897 GLCEO94923 617 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 ZNF205O95201 554 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 FSTL3O95633 263 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 CYB5R3P00387 301 aaPredicted RBP13.49□□□□□ -0.25
USE1-201ENST00000263897 PRKACGP22612 351 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 CA6P23280 308 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 CPT2P23786 658 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 POU1F1P28069 291 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 GSTT1P30711 240 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 CD200P41217 278 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 SLC15A1P46059 708 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 SEC61A1P61619 476 aaKnown RBP13.49□□□□□ -0.25
USE1-201ENST00000263897 GLYATL3Q5SZD4 288 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 DPY19L4Q7Z388 723 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 HS3ST5Q8IZT8 346 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 OR2AE1Q8NHA4 323 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 ERGIC1Q969X5 290 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 OTULINQ96BN8 352 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 INTS14Q96SY0 518 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 YY1AP1Q9H869 796 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 ZNF556Q9HAH1 456 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 MMP26Q9NRE1 261 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 DNAJB9Q9UBS3 223 aa13.49□□□□□ -0.25
USE1-201ENST00000263897 FBN3Q75N90 2809 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 GGT3PA6NGU5 568 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 CEACAM18A8MTB9 384 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 A8MXK9 166 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 GSC2O15499 205 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 GMDSO60547 372 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 FKBP6O75344 327 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 E2F6O75461 281 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 VENTXO95231 258 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 HMGN1P05114 100 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 SLC2A1P11166 492 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 OSMP13725 252 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 ANXA8P13928 327 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 ADRA2CP18825 462 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 EPHA1P21709 976 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 PAICSP22234 425 aaKnown RBP13.48□□□□□ -0.25
USE1-201ENST00000263897 GRB2P62993 217 aaKnown RBP13.48□□□□□ -0.25
USE1-201ENST00000263897 CBX1P83916 185 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 CDK5Q00535 292 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 EIF2B1Q14232 305 aaKnown RBP13.48□□□□□ -0.25
USE1-201ENST00000263897 OR8G1Q15617 311 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 SPATC1Q76KD6 591 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 RHOUQ7L0Q8 258 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 SHFQ7M4L6 423 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 ERI1Q8IV48 349 aaKnown RBP13.48□□□□□ -0.25
USE1-201ENST00000263897 C1orf87Q8N0U7 546 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 Q8TCH9 128 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 ZNF418Q8TF45 676 aaPredicted RBP13.48□□□□□ -0.25
USE1-201ENST00000263897 ABHD6Q9BV23 337 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 OR51V1Q9H2C8 321 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 NOP16Q9Y3C1 178 aaKnown RBP13.48□□□□□ -0.25
USE1-201ENST00000263897 N6AMT1Q9Y5N5 214 aa13.48□□□□□ -0.25
USE1-201ENST00000263897 PRR23D1E9PI22 279 aaPredicted RBP13.47□□□□□ -0.25
USE1-201ENST00000263897 FSHBP01225 129 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 PRR23D2P0DMB1 279 aaPredicted RBP13.47□□□□□ -0.25
USE1-201ENST00000263897 ZNF12P17014 697 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 RAD23AP54725 363 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 MPPED2Q15777 294 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 ESCO2Q56NI9 601 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 FAM201AQ5SY85 155 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 TIGD4Q8IY51 512 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 DEFB108BQ8NET1 73 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 OR6N2Q8NGY6 317 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 RNF133Q8WVZ7 376 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 SPSB4Q96A44 273 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 TMEM246Q9BRR3 403 aa13.47□□□□□ -0.25
USE1-201ENST00000263897 CADM1Q9BY67 442 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms