RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TSPO2Q5TGU0 170 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 NAA40Q86UY6 237 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 BSCL2Q96G97 398 aaPredicted RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 IP6K3Q96PC2 410 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 HDHD3Q9BSH5 251 aaPredicted RBP11.58□□□□□ -0.56
SNX1-201ENST00000261889 RNF126Q9BV68 326 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 UPB1Q9UBR1 384 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 CTSFQ9UBX1 484 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 GLS2Q9UI32 602 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 OR52A1Q9UKL2 312 aa11.58□□□□□ -0.56
SNX1-201ENST00000261889 RAD51DO75771 328 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 TPPPO94811 219 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 ZNF432O94892 652 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 VSIG8P0DPA2 414 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 CALCRP30988 508 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 MICBQ29980 383 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 C19orf47Q8N9M1 422 aaKnown RBP11.57□□□□□ -0.56
SNX1-201ENST00000261889 OR4K15Q8NH41 348 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 PTPMT1Q8WUK0 201 aaPredicted RBP11.57□□□□□ -0.56
SNX1-201ENST00000261889 LIN37Q96GY3 246 aaPredicted RBP11.57□□□□□ -0.56
SNX1-201ENST00000261889 C5orf34Q96MH7 638 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 RPS10P5Q9NQ39 176 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 A6NLC8 198 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 ACAA1P09110 424 aaPredicted RBP11.57□□□□□ -0.56
SNX1-201ENST00000261889 CPT2P23786 658 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 PSMB6P28072 239 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 ARFRP1Q13795 201 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 ANKRD55Q3KP44 614 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 ZNF528Q3MIS6 628 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 C5orf24Q7Z6I8 188 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 DYRK2Q92630 601 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 PIK3IP1Q96FE7 263 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 GPHA2Q96T91 129 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 GPER1Q99527 375 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 NIT2Q9NQR4 276 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 FBXL21Q9UKT6 434 aa11.57□□□□□ -0.56
SNX1-201ENST00000261889 A0A1B0GTI1 187 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 GPR89AB7ZAQ6 455 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 EFSO43281 561 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 XRCC2O43543 280 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 SFTA3P0C7M3 94 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 OR8U9P0C7N5 309 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 GPR89BP0CG08 455 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 ZNF823P16415 610 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 AGTR1P30556 359 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 EMP2P54851 167 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 CLDN6P56747 220 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 TLE1Q04724 770 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 RAB11FIP2Q7L804 512 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 BAP18Q8IXM2 172 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 C20orf196Q8IYI0 205 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 SPAG16Q8N0X2 631 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 OR8U1Q8NH10 309 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 RPS4Y2Q8TD47 263 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 CNTNAP3BQ96NU0 1288 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 RHOFQ9HBH0 211 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 ZNF701Q9NV72 531 aaPredicted RBP11.56□□□□□ -0.56
SNX1-201ENST00000261889 UQCC1Q9NVA1 299 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 ATPIF1Q9UII2 106 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 LSM5Q9Y4Y9 91 aaKnown RBP11.56□□□□□ -0.56
SNX1-201ENST00000261889 M0R036 132 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 TNFSF14O43557 240 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 SSX5O60225 188 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 CRHP06850 196 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 FBXW4P57775 412 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 ZNF616Q08AN1 781 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 DEFB133Q30KQ1 61 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 Q6ZS52 159 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 LILRB1Q8NHL6 650 aaPredicted RBP11.56□□□□□ -0.56
SNX1-201ENST00000261889 RNF128Q8TEB7 428 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 SFT2D1Q8WV19 159 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 HHLA2Q9UM44 414 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 CACNA1EQ15878 2313 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 NCOA6Q14686 2063 aaPredicted RBP11.56□□□□□ -0.56
SNX1-201ENST00000261889 NDUFS6O75380 124 aaKnown RBP11.56□□□□□ -0.56
SNX1-201ENST00000261889 H2BFMP0C1H6 154 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 HNRNPA2B1P22626 353 aaKnown RBP11.56□□□□□ -0.56
SNX1-201ENST00000261889 CBX5P45973 191 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 DHPSP49366 369 aaPredicted RBP11.56□□□□□ -0.56
SNX1-201ENST00000261889 MEOX2P50222 304 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 MECP2P51608 486 aaKnown RBP11.56□□□□□ -0.56
SNX1-201ENST00000261889 PDZD11Q5EBL8 140 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 ABHD12BQ7Z5M8 362 aaPredicted RBP11.56□□□□□ -0.56
SNX1-201ENST00000261889 PHYHIPQ92561 330 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 C8orf44Q96CB5 159 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 PIGMQ9H3S5 423 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 PCDHGA1Q9Y5H4 931 aa11.56□□□□□ -0.56
SNX1-201ENST00000261889 A0A0A6YYD4 124 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 SYT7O43581 403 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 CRTAPO75718 401 aaPredicted RBP11.55□□□□□ -0.56
SNX1-201ENST00000261889 CLPSP04118 112 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 PLCXD2Q0VAA5 305 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 NSDHLQ15738 373 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 FAM209BQ5JX69 171 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 NCMAPQ5T1S8 102 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 TMEM229BQ8NBD8 167 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 ARHGAP5-AS1Q96IT6 56 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 TMED7-TICAM2A0A0A6YYA0 188 aa11.55□□□□□ -0.56
SNX1-201ENST00000261889 A0A0A6YYH2 397 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms