RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PDSS1Q5T2R2 415 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 IQCF2Q8IXL9 164 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 BMPERQ8N8U9 685 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ADAD2Q8NCV1 583 aaKnown RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 OR6K3Q8NGY3 331 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 RNF141Q8WVD5 230 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ZC3H10Q96K80 434 aaKnown RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 GPX7Q96SL4 187 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 RPS10P5Q9NQ39 176 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 SLC22A11Q9NSA0 550 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 PARPBPQ9NWS1 579 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 KLK13Q9UKR3 277 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 EDARQ9UNE0 448 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 SLC5A6Q9Y289 635 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 FAM96BQ9Y3D0 163 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 A0A1W2PP11 408 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 C9orf170A2RU37 121 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ALG1L2C9J202 215 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ZNF354AO60765 605 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 ATG12O94817 140 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ZNF205O95201 554 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ABHD16AO95870 558 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 FCGR2AP12318 317 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CBR1P16152 277 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CASRP41180 1078 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 FHL1Q13642 323 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ZNF273Q14593 569 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 NR0B2Q15466 257 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 STK11Q15831 433 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 C14orf28Q4W4Y0 310 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 LPCAT3Q6P1A2 487 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 LINC00114Q6XXX2 140 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 MEX3BQ6ZN04 569 aaKnown RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 CBLN2Q8IUK8 224 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 SULF2Q8IWU5 870 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 BAP18Q8IXM2 172 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 C9orf40Q8IXQ3 194 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CLRN3Q8NCR9 226 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 OR1S1Q8NH92 325 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 OR1L3Q8NH93 324 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 KCNG3Q8TAE7 436 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 FNDC9Q8TBE3 224 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 NICN1Q9BSH3 213 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 TMPRSS13Q9BYE2 586 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CHST11Q9NPF2 352 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ANKRD10Q9NXR5 420 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ZNF629Q9UEG4 869 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 VSIG4Q9Y279 399 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 RBM7Q9Y580 266 aaKnown RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 NPTNQ9Y639 398 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 TRBV5-7A0A0A0MS05 114 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 LOC101059948A0A1B0GTJ6 334 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 A0A1B0GX78 115 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 A0A1W2PPC1 479 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 FAM221AA4D161 298 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 WRBO00258 174 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 SULT1C2O00338 296 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 NUDT21O43809 227 aaKnown RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 ZNF217O75362 1048 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 TRAPPC6AO75865 159 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 TSPAN15O95858 294 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 BGLAPP02818 100 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CD1AP06126 327 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 SNRNP70P08621 437 aaKnown RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 MST1P26927 711 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CD80P33681 288 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 OPRM1P35372 400 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ZNF121P58317 390 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 RAB30Q15771 203 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 SLC36A1Q7Z2H8 476 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 HSD17B13Q7Z5P4 300 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 SGPP2Q8IWX5 399 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 KCNRGQ8N5I3 272 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 EXD3Q8N9H8 876 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 OR1N1Q8NGS0 311 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ROBO4Q8WZ75 1007 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 MCHR2Q969V1 340 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ADAT3Q96EY9 351 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 OR6C1Q96RD1 312 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 C20orf24Q9BUV8 137 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 RGCCQ9H4X1 137 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 KCNIP3Q9Y2W7 256 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 IGHV3-15A0A0B4J1V0 119 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 K7EPK0 472 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 SOCS1O15524 211 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 SCGNO76038 276 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 SNAPINO95295 136 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 LCATP04180 440 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 CFIP05156 583 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 QDPRP09417 244 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 ZNF14P17017 642 aaPredicted RBP4.23□□□□□ -1.73
USP44-201ENST00000258499 OR3A4PP47883 348 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 CX3CR1P49238 355 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 PNLIPRP2P54317 469 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 RNF4P78317 190 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 PDZK1IP1Q13113 114 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 RSU1Q15404 277 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 MPPED2Q15777 294 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 FAM189A2Q15884 450 aa4.23□□□□□ -1.73
USP44-201ENST00000258499 CATSPERDQ86XM0 798 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms