RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 IGHV2-70P01814 119 aa19.36■□□□□ 0.69
LSM4-201ENST00000252816 HLA-DPB1P04440 258 aa19.36■□□□□ 0.69
LSM4-201ENST00000252816 SNAPC1Q16533 368 aa19.36■□□□□ 0.69
LSM4-201ENST00000252816 SHFQ7M4L6 423 aa19.36■□□□□ 0.69
LSM4-201ENST00000252816 TMEM186Q96B77 213 aa19.36■□□□□ 0.69
LSM4-201ENST00000252816 PLEKHA8Q96JA3 519 aa19.36■□□□□ 0.69
LSM4-201ENST00000252816 GAL3ST1Q99999 423 aa19.36■□□□□ 0.69
LSM4-201ENST00000252816 REPIN1Q9BWE0 567 aaKnown RBP19.36■□□□□ 0.69
LSM4-201ENST00000252816 HIF1ANQ9NWT6 349 aa19.36■□□□□ 0.69
LSM4-201ENST00000252816 IGHV3-64DA0A0J9YX35 117 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 ISPDA4D126 451 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 CD300LBA8K4G0 201 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 CIB2O75838 187 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 SRD5A1P18405 259 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 EPHA2P29317 976 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 SLC15A1P46059 708 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 CX3CR1P49238 355 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 MMP16P51512 607 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 GRB2P62993 217 aaKnown RBP19.35■□□□□ 0.69
LSM4-201ENST00000252816 PTGES3Q15185 160 aaKnown RBP19.35■□□□□ 0.69
LSM4-201ENST00000252816 CXXC5Q7LFL8 322 aaKnown RBP19.35■□□□□ 0.69
LSM4-201ENST00000252816 PEG10Q86TG7 708 aaKnown RBP19.35■□□□□ 0.69
LSM4-201ENST00000252816 GLCCI1Q86VQ1 547 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 SPRYD4Q8WW59 207 aaPredicted RBP19.35■□□□□ 0.69
LSM4-201ENST00000252816 RAB39BQ96DA2 213 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 MDFIQ99750 246 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 TEX12Q9BXU0 123 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 GABARAPL1Q9H0R8 117 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 KRT84Q9NSB2 600 aa19.35■□□□□ 0.69
LSM4-201ENST00000252816 IFNA2P01563 188 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 SBK2P0C263 348 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 FCGR1AP12314 374 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 HNF1AP20823 631 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 OPRL1P41146 370 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 NAA10P41227 235 aaPredicted RBP19.34■□□□□ 0.69
LSM4-201ENST00000252816 SRP9P49458 86 aaKnown RBP19.34■□□□□ 0.69
LSM4-201ENST00000252816 ESRRGP62508 458 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 SLC35D3Q5M8T2 416 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 KDM4DQ6B0I6 523 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 PRSS45Q7RTY3 260 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 ZDHHC13Q8IUH4 622 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 OR51F2Q8NH61 342 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 OTOSQ8NHW6 89 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 ZNF420Q8TAQ5 688 aaPredicted RBP19.34■□□□□ 0.69
LSM4-201ENST00000252816 TOR3AQ9H497 397 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 UBAP1Q9NZ09 502 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 KLHDC2Q9Y2U9 406 aa19.34■□□□□ 0.69
LSM4-201ENST00000252816 TMEM178BH3BS89 294 aa19.33■□□□□ 0.68
LSM4-201ENST00000252816 PRKYO43930 277 aa19.33■□□□□ 0.68
LSM4-201ENST00000252816 RPS7P62081 194 aaKnown RBP19.33■□□□□ 0.68
LSM4-201ENST00000252816 MAB21L1Q13394 359 aa19.33■□□□□ 0.68
LSM4-201ENST00000252816 APOFQ13790 326 aa19.33■□□□□ 0.68
LSM4-201ENST00000252816 ZMYND11Q15326 602 aa19.33■□□□□ 0.68
LSM4-201ENST00000252816 CCDC121Q6ZUS5 278 aa19.33■□□□□ 0.68
LSM4-201ENST00000252816 SEMA6AQ9H2E6 1030 aa19.33■□□□□ 0.68
LSM4-201ENST00000252816 DNAJC27Q9NZQ0 273 aa19.33■□□□□ 0.68
LSM4-201ENST00000252816 COL6A5A8TX70 2615 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 CCDC182A6NF36 153 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 GGT3PA6NGU5 568 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 M0R129 80 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 PLPP2O43688 288 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 ANXA2P07355 339 aaKnown RBP19.32■□□□□ 0.68
LSM4-201ENST00000252816 CA6P23280 308 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 HSD11B1P28845 292 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 PMELP40967 661 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 ZNF121P58317 390 aaPredicted RBP19.32■□□□□ 0.68
LSM4-201ENST00000252816 BTG1P62324 171 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 RHOUQ7L0Q8 258 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 MOGAT3Q86VF5 341 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 LRRC28Q86X40 367 aaPredicted RBP19.32■□□□□ 0.68
LSM4-201ENST00000252816 ZNF454Q8N9F8 522 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 THEM6Q8WUY1 208 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 SPSB4Q96A44 273 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 ZNF319Q9P2F9 582 aa19.32■□□□□ 0.68
LSM4-201ENST00000252816 TRAV20A0A0B4J274 112 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 ZAR1LA6NP61 321 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 CYB5R3P00387 301 aaPredicted RBP19.31■□□□□ 0.68
LSM4-201ENST00000252816 LYNP07948 512 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 ANPEPP15144 967 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 HCCSP53701 268 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 SLX4IPQ5VYV7 408 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 FAM57BQ71RH2 274 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 OR56B2PQ8NGI1 322 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 PYDC1Q8WXC3 89 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 SGK3Q96BR1 496 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 CENPNQ96H22 339 aaPredicted RBP19.31■□□□□ 0.68
LSM4-201ENST00000252816 TEAD3Q99594 435 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 G6PC2Q9NQR9 355 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 OAZ3Q9UMX2 235 aa19.31■□□□□ 0.68
LSM4-201ENST00000252816 TBX1O43435 398 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 XRCC2O43543 280 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 ZNF205O95201 554 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 H2BFMP0C1H6 154 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 PCMT1P22061 227 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 CD200P41217 278 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 GATA4P43694 442 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 EFNB1P98172 346 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 KPNB1Q14974 876 aaKnown RBP19.3■□□□□ 0.68
LSM4-201ENST00000252816 TMEM155Q4W5P6 130 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 C12orf73Q69YU5 71 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms