RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ZFP1Q6P2D0 407 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 CROCCP3Q8IVE0 287 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 CBR4Q8N4T8 237 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 OR2AE1Q8NHA4 323 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 TMEM163Q8TC26 289 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 RDH5Q92781 318 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 RNF166Q96A37 237 aaPredicted RBP11.63□□□□□ -0.55
VEGFA-201ENST00000230480 OTULINQ96BN8 352 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 SGK3Q96BR1 496 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 ZNF799Q96GE5 643 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 IL4I1Q96RQ9 567 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 KCNJ15Q99712 375 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
VEGFA-201ENST00000230480 PPP1R3EQ9H7J1 279 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 TUBG2Q9NRH3 451 aa11.63□□□□□ -0.55
VEGFA-201ENST00000230480 ZNF275Q9NSD4 429 aaPredicted RBP11.63□□□□□ -0.55
VEGFA-201ENST00000230480 FBXO9Q9UK97 447 aaPredicted RBP11.63□□□□□ -0.55
VEGFA-201ENST00000230480 IQCF6A8MYZ5 107 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 NDUFS8O00217 210 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 MAGEB4O15481 346 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-201ENST00000230480 CDC14BO60729 498 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 PFDN1O60925 122 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 SRSF10O75494 262 aaKnown RBP11.62□□□□□ -0.55
VEGFA-201ENST00000230480 TNFAIP8O95379 198 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 USF1P22415 310 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-201ENST00000230480 PMELP40967 661 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 BLVRAP53004 296 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 ZIK1Q3SY52 487 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-201ENST00000230480 MEPCEQ7L2J0 689 aaKnown RBP11.62□□□□□ -0.55
VEGFA-201ENST00000230480 ZNF554Q86TJ5 538 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 OR5AS1Q8N127 324 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 PQLC1Q8N2U9 271 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 SPSB4Q96A44 273 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 C1orf159Q96HA4 380 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 SLC30A2Q9BRI3 323 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 RBM38Q9H0Z9 239 aaKnown RBP11.62□□□□□ -0.55
VEGFA-201ENST00000230480 ADGRL4Q9HBW9 690 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 MYOZ1Q9NP98 299 aaPredicted RBP11.62□□□□□ -0.55
VEGFA-201ENST00000230480 CENPMQ9NSP4 180 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 TREM2Q9NZC2 230 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 KIF17Q9P2E2 1029 aa11.62□□□□□ -0.55
VEGFA-201ENST00000230480 DOCK11Q5JSL3 2073 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 LCATP04180 440 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 CSF3P09919 207 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 SELEP16581 610 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 TPTEP56180 551 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 LMO4P61968 165 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 ARL9Q6T311 187 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 DRAM2Q6UX65 266 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 USP51Q70EK9 711 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 RHOUQ7L0Q8 258 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 SSX6Q7RTT6 188 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 SLC16A9Q7RTY1 509 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 OR8G5Q8NG78 346 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 PPP1R14AQ96A00 147 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 EME1Q96AY2 570 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 HRASLS5Q96KN8 279 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 LYZL4Q96KX0 146 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 SIGLEC11Q96RL6 698 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 RBM4BQ9BQ04 359 aaKnown RBP11.61□□□□□ -0.55
VEGFA-201ENST00000230480 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 HAO2Q9NYQ3 351 aa11.61□□□□□ -0.55
VEGFA-201ENST00000230480 ZNF878C9JN71 531 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 H0YJX3 145 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 CD5LO43866 347 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 PNPP00491 289 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 HLA-DPB1P04440 258 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 MRPL3P09001 348 aaKnown RBP11.6□□□□□ -0.55
VEGFA-201ENST00000230480 PAICSP22234 425 aaKnown RBP11.6□□□□□ -0.55
VEGFA-201ENST00000230480 ACHEP22303 614 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 ALDH3A2P51648 485 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 AQP4P55087 323 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 HOXA4Q00056 320 aaPredicted RBP11.6□□□□□ -0.55
VEGFA-201ENST00000230480 MAB21L1Q13394 359 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 CARTPTQ16568 116 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 PCGF3Q3KNV8 242 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 FAM209AQ5JX71 171 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 ZNF684Q5T5D7 378 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 NXNL2Q5VZ03 156 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 LRRN1Q6UXK5 716 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 SHFQ7M4L6 423 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 MSI2Q96DH6 328 aaKnown RBP11.6□□□□□ -0.55
VEGFA-201ENST00000230480 ZNF582Q96NG8 517 aaPredicted RBP11.6□□□□□ -0.55
VEGFA-201ENST00000230480 FGF23Q9GZV9 251 aaPredicted RBP11.6□□□□□ -0.55
VEGFA-201ENST00000230480 TOR3AQ9H497 397 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 RIBC2Q9H4K1 309 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 CHODLQ9H9P2 273 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 BLOC1S6Q9UL45 172 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 CUBNO60494 3623 aa11.6□□□□□ -0.55
VEGFA-201ENST00000230480 IGHV1-69-2A0A0G2JMI3 117 aa11.59□□□□□ -0.55
VEGFA-201ENST00000230480 FAM157AC9JC47 383 aa11.59□□□□□ -0.55
VEGFA-201ENST00000230480 INAFM1C9JVW0 142 aa11.59□□□□□ -0.55
VEGFA-201ENST00000230480 J3QRE1 110 aa11.59□□□□□ -0.55
VEGFA-201ENST00000230480 PSMD9O00233 223 aa11.59□□□□□ -0.55
VEGFA-201ENST00000230480 TIMM8AO60220 97 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-201ENST00000230480 IGLV3-1P01715 115 aa11.59□□□□□ -0.55
VEGFA-201ENST00000230480 TMEM33P57088 247 aa11.59□□□□□ -0.55
VEGFA-201ENST00000230480 ZNF121P58317 390 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-201ENST00000230480 SELENOVP59797 346 aa11.59□□□□□ -0.55
VEGFA-201ENST00000230480 FAM3AP98173 230 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms