RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 C17orf107Q6ZR85 190 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 CELF2-AS1Q8N7Q2 184 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 BOLLQ8N9W6 283 aaKnown RBP12.29□□□□□ -0.44
TARDBP-231ENST00000639599 OR52L1Q8NGH7 329 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 OR4C15Q8NGM1 316 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 OR4K13Q8NH42 304 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 SLCO4A1Q96BD0 722 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 ZNF48Q96MX3 618 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-231ENST00000639599 NMNAT3Q96T66 252 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 OR52D1Q9H346 318 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 FN3KRPQ9HA64 309 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 TRIM36Q9NQ86 728 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 TNFRSF19Q9NS68 423 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 UFSP2Q9NUQ7 469 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 ERVK-18Q9QC07 812 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 B9D1Q9UPM9 204 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 LHFPL6Q9Y693 200 aa12.29□□□□□ -0.44
TARDBP-231ENST00000639599 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.28□□□□□ -0.44
TARDBP-231ENST00000639599 GGT3PA6NGU5 568 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 MLNRO43193 412 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 KNG1P01042 644 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 NPY4RP50391 375 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 BPIFB3P59826 476 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 FGF12P61328 243 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 MZT1Q08AG7 82 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 TRAP1Q12931 704 aaKnown RBP12.28□□□□□ -0.44
TARDBP-231ENST00000639599 RFX4Q33E94 735 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 FAM201AQ5SY85 155 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 C9orf139Q6ZV77 190 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 SDR9C7Q8NEX9 313 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 PROKR2Q8NFJ6 384 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 OR10S1Q8NGN2 331 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 TMIGD2Q96BF3 282 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 ADAT1Q9BUB4 502 aaKnown RBP12.28□□□□□ -0.44
TARDBP-231ENST00000639599 KCNG2Q9UJ96 466 aa12.28□□□□□ -0.44
TARDBP-231ENST00000639599 KIR2DS1A0A191URI9 304 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 A6NLC8 198 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 M0R135 149 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 HOXA3O43365 443 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-231ENST00000639599 FSTL3O95633 263 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 ACSM4P0C7M7 580 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 HIST1H1CP16403 213 aaKnown RBP12.27□□□□□ -0.45
TARDBP-231ENST00000639599 PRSS12P56730 875 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 HIST1H3AP68431 136 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 GK2Q14410 553 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-231ENST00000639599 SEC23BQ15437 767 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 TAF13Q15543 124 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 ZNF362Q5T0B9 420 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-231ENST00000639599 HIST2H3PS2Q5TEC6 136 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 PRAMEF6Q5VXH4 476 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 WDR25Q64LD2 544 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-231ENST00000639599 SLC18B1Q6NT16 456 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 TREML4Q6UXN2 200 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 BRD3OSQ6XYD6 125 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 CFAP77Q6ZQR2 320 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 HIST2H3AQ71DI3 136 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 OR6V1Q8N148 313 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 SLC26A10Q8NG04 563 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 ZNF799Q96GE5 643 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 BEX1Q9HBH7 125 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 DCAF13Q9NV06 445 aaKnown RBP12.27□□□□□ -0.45
TARDBP-231ENST00000639599 RNF7Q9UBF6 113 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 MAGEL2Q9UJ55 1249 aa12.27□□□□□ -0.45
TARDBP-231ENST00000639599 IGLV1-36A0A0B4J1U3 117 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 A0A1B0GUS0 222 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 MDFIC2A0A1B0GVS7 189 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 hCG_1807616A0A1W2PRN6 198 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 ARPC3O15145 178 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 IDH3BO43837 385 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 FAM20BO75063 409 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 PLATP00750 562 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 FABP3P05413 133 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 CA6P23280 308 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 OMGP23515 440 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 CD200P41217 278 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 GATA4P43694 442 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 DEFB112Q30KQ8 113 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 METTL11BQ5VVY1 283 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 RNF148Q8N7C7 305 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 OR4F5Q8NH21 305 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 Q8TCH9 128 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 C1orf147Q96MC9 270 aaPredicted RBP12.26□□□□□ -0.45
TARDBP-231ENST00000639599 NSMCE2Q96MF7 247 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 COPS4Q9BT78 406 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 SLITRK2Q9H156 845 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 FN3KQ9H479 309 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 CCDC134Q9H6E4 229 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 NOX4Q9NPH5 578 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 ABCD2Q9UBJ2 740 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
TARDBP-231ENST00000639599 TRAV38-1A0A0B4J264 116 aa12.25□□□□□ -0.45
TARDBP-231ENST00000639599 P2RY10O00398 339 aa12.25□□□□□ -0.45
TARDBP-231ENST00000639599 DCTN6O00399 190 aa12.25□□□□□ -0.45
TARDBP-231ENST00000639599 ADAM20O43506 726 aa12.25□□□□□ -0.45
TARDBP-231ENST00000639599 TOX4O94842 621 aa12.25□□□□□ -0.45
TARDBP-231ENST00000639599 LIPFP07098 398 aa12.25□□□□□ -0.45
TARDBP-231ENST00000639599 MDKP21741 143 aaPredicted RBP12.25□□□□□ -0.45
TARDBP-231ENST00000639599 FXYD6P3P58550 94 aa12.25□□□□□ -0.45
TARDBP-231ENST00000639599 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms