RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 SHFQ7M4L6 423 aa12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 PEG10Q86TG7 708 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 SPRYD4Q8WW59 207 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 HAVCR1Q96D42 359 aa12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 RAB3IPQ96QF0 476 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 SLC25A19Q9HC21 320 aa12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 PNRC2Q9NPJ4 139 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 DNAJC27Q9NZQ0 273 aa12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 ORC6Q9Y5N6 252 aa12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 NIPBLQ6KC79 2804 aaeCLIP12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 FN1P02751 2386 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-249ENST00000637777 PRODHO43272 600 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 SELENOFO60613 162 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 MITFO75030 526 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 TGFAP01135 160 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 SLC2A1P11166 492 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 PSKH1P11801 424 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 TNFRSF1AP19438 455 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 CRYBB2P43320 205 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 GRB2P62993 217 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 SLC3A1Q07837 685 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 APOFQ13790 326 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 PTGES3Q15185 160 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 GFOD2Q3B7J2 385 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 LCN1P1Q5VSP4 162 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 FBXW12Q6X9E4 464 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 NAA40Q86UY6 237 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 PARP8Q8N3A8 854 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 BBS1Q8NFJ9 593 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 OR10AD1Q8NGE0 317 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 OR10S1Q8NGN2 331 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 THEM6Q8WUY1 208 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 RAB1CQ92928 201 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 CENPNQ96H22 339 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 KCNJ15Q99712 375 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 C1QTNF5Q9BXJ0 243 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 RIBC2Q9H4K1 309 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 BRD7Q9NPI1 651 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 DDX28Q9NUL7 540 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 H2AFY2Q9P0M6 372 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 OAZ3Q9UMX2 235 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 CACNG2Q9Y698 323 aa12.25□□□□□ -0.45
CACNA1A-249ENST00000637777 GGT3PA6NGU5 568 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 LILRA1O75019 489 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 MRPL3P09001 348 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 TACSTD2P09758 323 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 H2BFMP0C1H6 154 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 IL2RGP31785 369 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 CX3CR1P49238 355 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 CDH15P55291 814 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 ACTR3P61158 418 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 TIGD6Q17RP2 521 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 TEX30Q5JUR7 227 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 SLC35D3Q5M8T2 416 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 LINC01590Q5TEZ4 76 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 MALRD1Q5VYJ5 2156 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 ZFP1Q6P2D0 407 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 DRAM2Q6UX65 266 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 C10orf67Q8IYJ2 551 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 OR8G5Q8NG78 346 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 OR13G1Q8NGZ3 307 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 OR2AE1Q8NHA4 323 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 ITLN1Q8WWA0 313 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 MSI2Q96DH6 328 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 DUS3LQ96G46 650 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 POM121Q96HA1 1249 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 OR2V2Q96R30 315 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 ABHD6Q9BV23 337 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 GABARAPL1Q9H0R8 117 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 LPAR2Q9HBW0 351 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 LAMP5Q9UJQ1 280 aa12.24□□□□□ -0.45
CACNA1A-249ENST00000637777 DYSFO75923 2080 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 NF1P21359 2839 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 IGHV3-64DA0A0J9YX35 117 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 M0R129 80 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 LMX1BO60663 402 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 RP2O75695 350 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 APOC1P02654 83 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 LYNP07948 512 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 HOXB4P17483 251 aaPredicted RBP12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 CDK5R2Q13319 367 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 GK2Q14410 553 aaPredicted RBP12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 RSPO1Q2MKA7 263 aaPredicted RBP12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 SNAI3Q3KNW1 292 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 CHRFAM7AQ494W8 412 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 LINC01356Q8N9X3 169 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 CLDND2Q8NHS1 167 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 ST7LQ8TDW4 575 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 HPS1Q92902 700 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 CIB1Q99828 191 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 GAL3ST1Q99999 423 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 TOR3AQ9H497 397 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 SP140LQ9H930 580 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 TMEM100Q9NV29 134 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 UBAP1Q9NZ09 502 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 PPP1R3CQ9UQK1 317 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 WIPI2Q9Y4P8 454 aa12.23□□□□□ -0.45
CACNA1A-249ENST00000637777 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms