RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 ELP2Q6IA86 826 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 C11orf87Q6NUJ2 197 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 NPSR1Q6W5P4 371 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 PRSS41Q7RTY9 318 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TRAPPC6BQ86SZ2 158 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ARMC10Q8N2F6 343 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 OR5D14Q8NGL3 314 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 OR4C3Q8NH37 302 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CCL4L1Q8NHW4 92 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 NKD1Q969G9 470 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 MCHR2Q969V1 340 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 DDIT4LQ96D03 193 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 GPR174Q9BXC1 333 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 NKX6-2Q9C056 277 aaPredicted RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 GAREM1Q9H706 876 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CENPMQ9NSP4 180 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 RASL12Q9NYN1 266 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 FBXL2Q9UKC9 423 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 OR52A1Q9UKL2 312 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TMED7-TICAM2A0A0A6YYA0 188 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 LOC107986453A0A1B0GWG9 222 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 LILRA5A6NI73 299 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 H7C1C5 153 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 SYT7O43581 403 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 EML2O95834 649 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ABHD16AO95870 558 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 S100A9P06702 114 aaKnown RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 FBXO45P0C2W1 286 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CT45A8P0DMV1 189 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CT45A9P0DMV2 189 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 PVALBP20472 110 aaPredicted RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 HSD11B1P28845 292 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ECI1P42126 302 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 SUMO3P55854 103 aaPredicted RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 SLC26A5P58743 744 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 LCN6P62502 163 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 BLOC1S1P78537 153 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ZNF273Q14593 569 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ACKR1Q16570 336 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 SWI5Q1ZZU3 235 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CT45A2Q5DJT8 189 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 MESTQ5EB52 335 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 YOD1Q5VVQ6 348 aaPredicted RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 C1orf140Q5VVS0 124 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 NKAIN2Q5VXU1 208 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 NHLRC1Q6VVB1 395 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 KCTD9Q7L273 389 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 FAM122BQ7Z309 247 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ZNF101Q8IZC7 436 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TEX29Q8N6K0 151 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CLEC1AQ8NC01 280 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 RNF141Q8WVD5 230 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 RGP1Q92546 391 aaPredicted RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TMEM68Q96MH6 324 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ADOQ96SZ5 270 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 GPER1Q99527 375 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 NUDT16L1Q9BRJ7 211 aaKnown RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 SHARPINQ9H0F6 387 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 C1orf198Q9H425 327 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TREM1Q9NP99 234 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ZFP57Q9NU63 452 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ASF1BQ9NVP2 202 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 KCNG2Q9UJ96 466 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 C14orf166Q9Y224 244 aaKnown RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 PRELID3BQ9Y3B1 194 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TMED7Q9Y3B3 224 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TRAV8-7A0A075B6U6 113 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TMEM269A0A1B0GVZ9 245 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 PCP4L1A6NKN8 68 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 A8MUA0 341 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 K7EQS6 105 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 STK17BO94768 372 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 IFNA21P01568 189 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CD8AP01732 235 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CSN2P05814 226 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 LIPCP11150 499 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ADRA2CP18825 462 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ADH6P28332 368 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CAPZBP47756 277 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 PCP4P48539 62 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 LUMP51884 338 aaPredicted RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 PNLIPRP2P54317 469 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TAS2R46P59540 309 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 BTG2P78543 158 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 OC90Q02509 493 aaPredicted RBP3.57□□□□□ -1.84
SCN1A-214ENST00000637038 TLE3Q04726 772 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 HMGN3Q15651 99 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 LRFN4Q6PJG9 635 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 DNM1P46Q6ZS02 220 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 RAB11FIP2Q7L804 512 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 OR2W3Q7Z3T1 314 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 BIVMQ86UB2 503 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CARFQ8N187 725 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 EXD3Q8N9H8 876 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 LRRC75AQ8NAA5 344 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 OR13H1Q8NG92 308 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 CASTOR1Q8WTX7 329 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ST8SIA1Q92185 356 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 DCUN1D4Q92564 292 aa3.57□□□□□ -1.84
SCN1A-214ENST00000637038 ZNF775Q96BV0 537 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms