RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 HNF1AP20823 631 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 EDNRAP25101 427 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 RBMS1P29558 406 aaKnown RBP10.27□□□□□ -0.76
CLN6-217ENST00000636964 MAGEB1P43366 347 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 SLC25A1P53007 311 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 SIRPAP78324 504 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 Q0VFX4 171 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 EMC4Q5J8M3 183 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 SLC25A25Q6KCM7 469 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 NHLRC1Q6VVB1 395 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 GALNTL5Q7Z4T8 443 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 MDGA2Q7Z553 956 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 FGD2Q7Z6J4 655 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 M1APQ8TC57 530 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 SLC39A7Q92504 469 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 TMEM9BQ9NQ34 198 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 MED29Q9NX70 200 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 ST6GALNAC2Q9UJ37 374 aa10.27□□□□□ -0.76
CLN6-217ENST00000636964 FARSAQ9Y285 508 aaKnown RBP10.27□□□□□ -0.76
CLN6-217ENST00000636964 TRBV2A0A0J9YWF9 115 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 TMEM210A6NLX4 147 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 MCRIP1C9JLW8 97 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 H3BSH0 61 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 CBR3O75828 277 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 MT-CO3P00414 261 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 CYC1P08574 325 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 NPR2P20594 1047 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 SUMO3P55854 103 aaPredicted RBP10.27□□□□□ -0.77
CLN6-217ENST00000636964 TLE3Q04726 772 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 IL10RAQ13651 578 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 HABP2Q14520 560 aaPredicted RBP10.27□□□□□ -0.77
CLN6-217ENST00000636964 HFEQ30201 348 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 DMKNQ6E0U4 476 aaPredicted RBP10.27□□□□□ -0.77
CLN6-217ENST00000636964 PRSS45Q7RTY3 260 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 SYT9Q86SS6 491 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 THEM6Q8WUY1 208 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 DDIT4LQ96D03 193 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 ORAI1Q96D31 301 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 PDCD10Q9BUL8 212 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 EMC6Q9BV81 110 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 C20orf85Q9H1P6 137 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 TXNIPQ9H3M7 391 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 AUNIPQ9H7T9 357 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 RPH3ALQ9UNE2 315 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 A0A1B0GTH9 108 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 PRSS37A4D1T9 235 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 A8MXE2 369 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 ADRB1P08588 477 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 H2AFB1P0C5Y9 115 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 IFNGR1P15260 489 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 SSR4P51571 173 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 POU3F1Q03052 451 aaPredicted RBP10.27□□□□□ -0.77
CLN6-217ENST00000636964 KLF9Q13886 244 aaPredicted RBP10.27□□□□□ -0.77
CLN6-217ENST00000636964 MEP1BQ16820 701 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 ACSM3Q53FZ2 586 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 HBMQ6B0K9 141 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 OPN5Q6U736 354 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 HAVCR2Q8TDQ0 301 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 ROBO4Q8WZ75 1007 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 NKIRAS2Q9NYR9 191 aa10.27□□□□□ -0.77
CLN6-217ENST00000636964 MRPL15Q9P015 296 aaKnown RBP10.27□□□□□ -0.77
CLN6-217ENST00000636964 MRPS18BQ9Y676 258 aaKnown RBP10.27□□□□□ -0.77
CLN6-217ENST00000636964 DIRAS3O95661 229 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 HCKP08631 526 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 CTLA4P16410 223 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 MSX1P28360 303 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 ACTA2P62736 377 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 ACTG2P63267 376 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 MYBPHQ13203 477 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 LRRC69Q6ZNQ3 347 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 H1FNTQ75WM6 255 aaPredicted RBP10.26□□□□□ -0.77
CLN6-217ENST00000636964 SLC35D2Q76EJ3 337 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 SLC16A9Q7RTY1 509 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 HSD17B13Q7Z5P4 300 aaPredicted RBP10.26□□□□□ -0.77
CLN6-217ENST00000636964 ZNF519Q8TB69 540 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 GCDHQ92947 438 aaPredicted RBP10.26□□□□□ -0.77
CLN6-217ENST00000636964 LRRC46Q96FV0 321 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 OR5B2Q96R09 309 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 IKZF2Q9UKS7 526 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 B9D1Q9UPM9 204 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 MOKQ9UQ07 419 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 FRYQ5TBA9 3013 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 MPTX1A8MV57 137 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 FZD7O75084 574 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 MPZL1O95297 269 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 CALCRP30988 508 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 TAS2R43P59537 309 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 FMODQ06828 376 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 TGIF2LXQ8IUE1 241 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 TOMM5Q8N4H5 51 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 ZNF454Q8N9F8 522 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 MFSD8Q8NHS3 518 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 MRGPRX4Q96LA9 322 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 AMELYQ99218 206 aa10.26□□□□□ -0.77
CLN6-217ENST00000636964 PURGQ9UJV8 347 aaKnown RBP10.26□□□□□ -0.77
CLN6-217ENST00000636964 FREM3P0C091 2139 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 GALR2O43603 387 aaPredicted RBP10.25□□□□□ -0.77
CLN6-217ENST00000636964 ATG12O94817 140 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 KLK2P20151 261 aa10.25□□□□□ -0.77
CLN6-217ENST00000636964 VEGFCP49767 419 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms