RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SNRNP35Q16560 246 aaKnown RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 TATDN3Q17R31 274 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 TMEM183BQ1AE95 376 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 MICBQ29980 383 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 KLHL40Q2TBA0 621 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 DEFB116Q30KQ4 102 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC25A52Q3SY17 297 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 PARP15Q460N3 678 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 GGTA1PQ4G0N0 100 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LINC01620Q4KN68 170 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 BCL7AQ4VC05 210 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LINC00483Q53H64 154 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LRRC10Q5BKY1 277 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 PIGGQ5H8A4 983 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 C1orf100Q5SVJ3 147 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 C9orf64Q5T6V5 341 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 NCR3LG1Q68D85 454 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SPECC1LQ69YQ0 1117 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OR52E8Q6IFG1 317 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 FRMPD2BQ6IN97 320 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM71E1Q6IPT2 247 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC25A34Q6PIV7 304 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ACP7Q6ZNF0 438 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF621Q6ZSS3 439 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM92BQ6ZTR7 304 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CENPQQ7L2Z9 268 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OTUD6AQ7L8S5 288 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CAMK2N1Q7Z7J9 78 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 THOC6Q86W42 341 aaKnown RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 TMEM183AQ8IXX5 376 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ADGRG4Q8IZF6 3080 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 DEFB106AQ8N104 65 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC25A45Q8N413 288 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SVOPLQ8N434 492 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CLDN19Q8N6F1 224 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CYB561D1Q8N8Q1 229 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM184AQ8NB25 1140 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 IPMKQ8NFU5 416 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OR4D9Q8NGE8 314 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OR4C6Q8NH72 309 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OR10G6Q8NH81 332 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ERMNQ8TAM6 284 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 TRMT10AQ8TBZ6 339 aaKnown RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LKAAEAR1Q8TD35 194 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 MCOLN3Q8TDD5 553 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC37A2Q8TED4 501 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 DOK4Q8TEW6 326 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SPRYD4Q8WW59 207 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SRSF12Q8WXF0 261 aaKnown RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CHCHD10Q8WYQ3 142 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 KIFAP3Q92845 792 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 HAUS1Q96CS2 278 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CXorf40BQ96DE9 158 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 MED8Q96G25 268 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RNF185Q96GF1 192 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 PAGE5Q96GU1 130 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 FAM210BQ96KR6 192 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 C7orf34Q96L11 122 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 C16orf45Q96MC5 204 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RPRD1AQ96P16 312 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 TGM7Q96PF1 710 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RBM14Q96PK6 669 aaKnown RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 TBX15Q96SF7 602 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 KLF6Q99612 283 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 COL12A1Q99715 3063 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OMDQ99983 421 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LZTS2Q9BRK4 669 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC35A5Q9BS91 424 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RTBDNQ9BSG5 229 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CRACR2AQ9BSW2 395 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CHRDL1Q9BU40 450 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ALG12Q9BV10 488 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 NUDT9Q9BW91 350 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OR11A1Q9GZK7 315 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 GBA3Q9H227 469 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RHBGQ9H310 441 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CDC42EP4Q9H3Q1 356 aaKnown RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 GOLPH3Q9H4A6 298 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CLSTN2Q9H4D0 955 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 REEP4Q9H6H4 257 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 PARVGQ9HBI0 331 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 EML4Q9HC35 981 aaKnown RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 SLCO1B3Q9NPD5 702 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 POLE4Q9NR33 117 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 NUDT15Q9NV35 164 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ASF1BQ9NVP2 202 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 DDIT4Q9NX09 232 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 IL36GQ9NZH8 169 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RNF14Q9UBS8 474 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF282Q9UDV7 671 aaPredicted RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 OR12D3Q9UGF7 316 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CRCT1Q9UGL9 99 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 TBK1Q9UHD2 729 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 LSM7Q9UK45 103 aaKnown RBP0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 CDH9Q9ULB4 789 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 NPIPA1Q9UND3 350 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 RPH3ALQ9UNE2 315 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 PSMD13Q9UNM6 376 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 TFR2Q9UP52 801 aa0.68□□□□□ -2.3
SMARCB1-209ENST00000635578 B9D1Q9UPM9 204 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms