RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 CD55P08174 381 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 RPS7P62081 194 aaKnown RBP13.32□□□□□ -0.28
LINC00339-207ENST00000634712 PCK2Q16822 640 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 CHRFAM7AQ494W8 412 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 LINC01590Q5TEZ4 76 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 FAHD1Q6P587 224 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 DRAM2Q6UX65 266 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 PGAP1Q75T13 922 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 SPATC1Q76KD6 591 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 ASRGL1Q7L266 308 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 DPY19L4Q7Z388 723 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 CPOQ8IVL8 374 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 LINC01356Q8N9X3 169 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 OR8G5Q8NG78 346 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 OR10S1Q8NGN2 331 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 OR13G1Q8NGZ3 307 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 LRTOMTQ8WZ04 291 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 KCNJ15Q99712 375 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 BEX2Q9BXY8 128 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 PRRG3Q9BZD7 231 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 SLC25A19Q9HC21 320 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 DDX28Q9NUL7 540 aaKnown RBP13.32□□□□□ -0.28
LINC00339-207ENST00000634712 HSD11B1P28845 292 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 IL2RGP31785 369 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 PRKXP51817 358 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 ESRRGP62508 458 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 GRB2P62993 217 aaKnown RBP13.32□□□□□ -0.28
LINC00339-207ENST00000634712 KRTAP21-3Q3LHN1 58 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 AVPI1Q5T686 147 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 Q6ZR03 302 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 MRPL21Q7Z2W9 205 aaKnown RBP13.32□□□□□ -0.28
LINC00339-207ENST00000634712 PARP8Q8N3A8 854 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 ZNF283Q8N7M2 679 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 BHLHE23Q8NDY6 225 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 CLDND2Q8NHS1 167 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 SPRYD4Q8WW59 207 aaPredicted RBP13.32□□□□□ -0.28
LINC00339-207ENST00000634712 ZMYND19Q96E35 227 aaPredicted RBP13.32□□□□□ -0.28
LINC00339-207ENST00000634712 SHARPINQ9H0F6 387 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 TMEM100Q9NV29 134 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 TMEM160Q9NX00 188 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 LPAR3Q9UBY5 353 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 IL19Q9UHD0 177 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 ENOPH1Q9UHY7 261 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 CDC42EP3Q9UKI2 254 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 CACNG2Q9Y698 323 aa13.32□□□□□ -0.28
LINC00339-207ENST00000634712 IQCF6A8MYZ5 107 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 PRODHO43272 600 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 APOC1P02654 83 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 GK2Q14410 553 aaPredicted RBP13.31□□□□□ -0.28
LINC00339-207ENST00000634712 PTGES3Q15185 160 aaKnown RBP13.31□□□□□ -0.28
LINC00339-207ENST00000634712 SLC35D3Q5M8T2 416 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 CXXC5Q7LFL8 322 aaKnown RBP13.31□□□□□ -0.28
LINC00339-207ENST00000634712 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.31□□□□□ -0.28
LINC00339-207ENST00000634712 C10orf67Q8IYJ2 551 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 ST7LQ8TDW4 575 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 THEM6Q8WUY1 208 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 SOX7Q9BT81 388 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 SEMA6AQ9H2E6 1030 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 TOR3AQ9H497 397 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 SP140LQ9H930 580 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 WIPI2Q9Y4P8 454 aa13.31□□□□□ -0.28
LINC00339-207ENST00000634712 ISPDA4D126 451 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 B4DSR2 109 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 PSKH1P11801 424 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 HNF1AP20823 631 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 SRP9P49458 86 aaKnown RBP13.3□□□□□ -0.28
LINC00339-207ENST00000634712 RAD23AP54725 363 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 CDH15P55291 814 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 TIGD4Q8IY51 512 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 ZNF454Q8N9F8 522 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 ITLN1Q8WWA0 313 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 CENPNQ96H22 339 aaPredicted RBP13.3□□□□□ -0.28
LINC00339-207ENST00000634712 OR2V2Q96R30 315 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 ABHD6Q9BV23 337 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 MARCH7Q9H992 704 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 H2AFY2Q9P0M6 372 aaPredicted RBP13.3□□□□□ -0.28
LINC00339-207ENST00000634712 PPP1R3CQ9UQK1 317 aa13.3□□□□□ -0.28
LINC00339-207ENST00000634712 MALRD1Q5VYJ5 2156 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 GGT3PA6NGU5 568 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 WNT9BO14905 357 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 TBX1O43435 398 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 MITFO75030 526 aaPredicted RBP13.29□□□□□ -0.28
LINC00339-207ENST00000634712 IFNA2P01563 188 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 ANXA2P07355 339 aaKnown RBP13.29□□□□□ -0.28
LINC00339-207ENST00000634712 LYNP07948 512 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 H2BFMP0C1H6 154 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 ANPEPP15144 967 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 OTX1P32242 354 aaPredicted RBP13.29□□□□□ -0.28
LINC00339-207ENST00000634712 CX3CR1P49238 355 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 APOFQ13790 326 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 SNAI3Q3KNW1 292 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 SPRNQ5BIV9 151 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 OR10AD1Q8NGE0 317 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 PYDC1Q8WXC3 89 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 RAB39BQ96DA2 213 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 SLC30A2Q9BRI3 323 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 GABARAPL1Q9H0R8 117 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 TMEM106BQ9NUM4 274 aa13.29□□□□□ -0.28
LINC00339-207ENST00000634712 NOP16Q9Y3C1 178 aaKnown RBP13.29□□□□□ -0.28
LINC00339-207ENST00000634712 JMJD1CQ15652 2540 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms