RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	C20orf141	Q9NUB4	165 aa		13.72	□□□□□ -0.21
BBS1-225	ENST00000630659	LPAR3	Q9UBY5	353 aa		13.72	□□□□□ -0.21
BBS1-225	ENST00000630659	CDV3	Q9UKY7	258 aa	Known RBP	13.72	□□□□□ -0.21
BBS1-225	ENST00000630659	MOK	Q9UQ07	419 aa		13.72	□□□□□ -0.21
BBS1-225	ENST00000630659	BDP1	A6H8Y1	2624 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	ASCC3	Q8N3C0	2202 aa	Known RBP	13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	C9orf170	A2RU37	121 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	VSTM2B	A6NLU5	285 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	PIN1P1	O15428	100 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	ALOX12B	O75342	701 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	ZNF432	O94892	652 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	CRMP1	Q14194	572 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	TMEM205	Q6UW68	189 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	KIRREL2	Q6UWL6	708 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	RHOU	Q7L0Q8	258 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	SSX6	Q7RTT6	188 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	C1QL4	Q86Z23	238 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	PRR22	Q8IZ63	422 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	BOLL	Q8N9W6	283 aa	Known RBP	13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	CLEC1A	Q8NC01	280 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	AGBL5	Q8NDL9	886 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	PPP1R1C	Q8WVI7	109 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	BPIFA2	Q96DR5	249 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	ADO	Q96SZ5	270 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	GGACT	Q9BVM4	153 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	RHOF	Q9HBH0	211 aa		13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	MEPE	Q9NQ76	525 aa	Predicted RBP	13.71	□□□□□ -0.21
BBS1-225	ENST00000630659	IGHV3-20	A0A0C4DH32	117 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	OR8U8	P0C7N1	319 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	MUC1	P15941	1255 aa	Predicted RBP	13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	NFYB	P25208	207 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	IL12B	P29460	328 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	PRSS3	P35030	304 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	EMP2	P54851	167 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	TAS2R60	P59551	318 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	LINC00114	Q6XXX2	140 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	STAC2	Q6ZMT1	411 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	SLC35F2	Q8IXU6	374 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	ZNF441	Q8N8Z8	693 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	GATS	Q8NAP1	163 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	METTL21A	Q8WXB1	218 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	GNG8	Q9UK08	70 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	ICAM5	Q9UMF0	924 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	NCOR1	O75376	2440 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	TRBV6-7	A0A0A0MS04	114 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	CDC14C	A4D256	554 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	TSPAN2	O60636	221 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	FARS2	O95363	451 aa	Known RBP	13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	SFTA3	P0C7M3	94 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	ACP1	P24666	158 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	SLC6A6	P31641	620 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	CD226	Q15762	336 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	OR4K17	Q8NGC6	315 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	FAHD2A	Q96GK7	314 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	SMIM8	Q96KF7	97 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	SLC25A18	Q9H1K4	315 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	SLC26A1	Q9H2B4	701 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	GFOD1	Q9NXC2	390 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	STEAP1	Q9UHE8	339 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	SIGLEC7	Q9Y286	467 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	NOP16	Q9Y3C1	178 aa	Known RBP	13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	TIMM10B	Q9Y5J6	103 aa		13.7	□□□□□ -0.22
BBS1-225	ENST00000630659	LOC390937	A0A1W2PQ73	354 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	RNASEK-C17orf49	H0YIS7	233 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	PPP1R3D	O95685	299 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	FUT1	P19526	365 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	CPT2	P23786	658 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	LAP3	P28838	519 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	RIDA	P52758	137 aa	Known RBP	13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	CYCS	P99999	105 aa	Known RBP	13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	PLCXD2	Q0VAA5	305 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	ZNF239	Q16600	458 aa	Known RBP	13.69	□□□□□ -0.22
BBS1-225	ENST00000630659		Q499Y3	187 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	SLC35D3	Q5M8T2	416 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	LSR	Q86X29	649 aa	Predicted RBP	13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	GABRG1	Q8N1C3	465 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	NFAM1	Q8NET5	270 aa	Predicted RBP	13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	RHBDD1	Q8TEB9	315 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	ZBTB8A	Q96BR9	441 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	OR5B2	Q96R09	309 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	PDCD1LG2	Q9BQ51	273 aa		13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.69	□□□□□ -0.22
BBS1-225	ENST00000630659	TVP23A	A6NH52	213 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	GPR37	O15354	613 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	SLC31A2	O15432	143 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	ZNF264	O43296	627 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	OIP5	O43482	229 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	CDC40	O60508	579 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	F12	P00748	615 aa	Predicted RBP	13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	IFNA17	P01571	189 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	CD5	P06127	495 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	KLK3	P07288	261 aa	Predicted RBP	13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	SLC6A9	P48067	706 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	SPCS3	P61009	180 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	RNF4	P78317	190 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	DHRS2	Q13268	280 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	SKP2	Q13309	424 aa		13.68	□□□□□ -0.22
BBS1-225	ENST00000630659	SGCA	Q16586	387 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms