RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SIRPDQ9H106 197 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 MMP27Q9H306 513 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 PNRC2Q9NPJ4 139 aaKnown RBP9.14□□□□□ -0.95
DDX41-218ENST00000625286 ATPIF1Q9UII2 106 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 RPS6KA6Q9UK32 745 aa9.14□□□□□ -0.95
DDX41-218ENST00000625286 KMT2CQ8NEZ4 4911 aaKnown RBP9.14□□□□□ -0.95
DDX41-218ENST00000625286 A0A0U1RQK1 487 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 GPR137BO60478 399 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 CLPXO76031 633 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 TXNDC12O95881 172 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 CD200P41217 278 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 IER3P46695 156 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 BPIFB3P59826 476 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 POU4F2Q12837 409 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 COX10Q12887 443 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 SLC18B1Q6NT16 456 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 ZNF620Q6ZNG0 422 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 CBLL1Q75N03 491 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 NLRC3Q7RTR2 1065 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 LINC00346Q8IVM7 164 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 PIP4P2Q8N4L2 257 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 TMEM86BQ8N661 226 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 GJC3Q8NFK1 279 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 SLCO4A1Q96BD0 722 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 HSH2DQ96JZ2 352 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 WDFY2Q96P53 400 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 FUZQ9BT04 418 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 SRA1Q9HD15 236 aaKnown RBP9.13□□□□□ -0.95
DDX41-218ENST00000625286 B9D1Q9UPM9 204 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 RNF114Q9Y508 228 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 NOTCH3Q9UM47 2321 aa9.13□□□□□ -0.95
DDX41-218ENST00000625286 NBEAL2Q6ZNJ1 2754 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 IGHV1-69DA0A0B4J2H0 117 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 TRBV4-1A0A0J9YWV2 114 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 A0A1B0GW55 424 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 LRRC30A6NM36 301 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 C3orf80F5H4A9 247 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 F5H5K5 113 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 P2RY10O00398 339 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 CXCR6O00574 342 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 ENSAO43768 121 aaKnown RBP9.12□□□□□ -0.95
DDX41-218ENST00000625286 TOX4O94842 621 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 NDUFB2O95178 105 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 PTBP3O95758 552 aaKnown RBP9.12□□□□□ -0.95
DDX41-218ENST00000625286 ZNF682O95780 498 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 IGHV1-69P01742 117 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 CRYBA1P05813 215 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 DUX4L2P0CJ85 424 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 DUX4L3P0CJ86 424 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 DUX4L4P0CJ87 422 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 DUX4L5P0CJ88 424 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 DUX4L6P0CJ89 424 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 DUX4L7P0CJ90 424 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 PSKH1P11801 424 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 CA6P23280 308 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 GGT2P36268 569 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 PRB3Q04118 309 aaPredicted RBP9.12□□□□□ -0.95
DDX41-218ENST00000625286 LIPEQ05469 1076 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 IFI44LQ53G44 452 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 HIST2H2BDQ6DRA6 164 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 GPR139Q6DWJ6 353 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 DUX4L9Q6RFH8 374 aaPredicted RBP9.12□□□□□ -0.95
DDX41-218ENST00000625286 Q6ZSV7 163 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 ZNF826PQ6ZT77 177 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 PDZD9Q8IXQ8 264 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 C1orf87Q8N0U7 546 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 CELF2-AS1Q8N7Q2 184 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 SLC26A10Q8NG04 563 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 RCN3Q96D15 328 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 FAM71F1Q96KD3 344 aaPredicted RBP9.12□□□□□ -0.95
DDX41-218ENST00000625286 HDHD2Q9H0R4 259 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 ACOXLQ9NUZ1 547 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 ADA2Q9NZK5 511 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 DUX4Q9UBX2 424 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 POMT1Q9Y6A1 747 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 ENPP4Q9Y6X5 453 aa9.12□□□□□ -0.95
DDX41-218ENST00000625286 A0A1W2PRQ8 180 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 BBIP1A8MTZ0 92 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 M0QZ24 198 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 LGALS8O00214 317 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 NME4O00746 187 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 SERPINA1P01009 418 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 NCK1P16333 377 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 IFNA8P32881 189 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 MDH1P40925 334 aaKnown RBP9.11□□□□□ -0.95
DDX41-218ENST00000625286 CENPAP49450 140 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 DLX1P56177 255 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 ARF6P62330 175 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 ZNF92Q03936 586 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 DGCR6Q14129 220 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 TAF9Q16594 264 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 SNAI3Q3KNW1 292 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 C8orf82Q6P1X6 216 aaPredicted RBP9.11□□□□□ -0.95
DDX41-218ENST00000625286 DPY19L2P2Q6ZN68 376 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 ADCK1Q86TW2 530 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 FAM90A1Q86YD7 464 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 C11orf53Q8IXP5 236 aa9.11□□□□□ -0.95
DDX41-218ENST00000625286 BOLLQ8N9W6 283 aaKnown RBP9.11□□□□□ -0.95
DDX41-218ENST00000625286 ZSCAN4Q8NAM6 433 aaPredicted RBP9.11□□□□□ -0.95
DDX41-218ENST00000625286 SSMEM1Q8WWF3 244 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms