RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 C14orf28Q4W4Y0 310 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 RNASE12Q5GAN4 147 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 AKR1C8PQ5T2L2 129 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 ULK3Q6PHR2 472 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 AGTRAPQ6RW13 159 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OPN5Q6U736 354 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CD300LGQ6UXG3 332 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 UNQ6494/PRO21346Q6UXR6 183 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 UNQ6126/PRO20091Q6UXV3 157 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC25A26Q70HW3 274 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 MED25Q71SY5 747 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 RABEPKQ7Z6M1 372 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CLDN19Q8N6F1 224 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 BOLLQ8N9W6 283 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR10H4Q8NGA5 316 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR4E2Q8NGC2 313 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR2AP1Q8NGE2 309 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR10A7Q8NGE5 316 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR5AN1Q8NGI8 311 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR5L2Q8NGL0 311 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR10G4Q8NGN3 311 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR4C6Q8NH72 309 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CPT1CQ8TCG5 803 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 ABHD5Q8WTS1 349 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 SECTM1Q8WVN6 248 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMED6Q8WW62 240 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 KCNE4Q8WWG9 221 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 FBXO32Q969P5 355 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 NEIL2Q969S2 332 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 MCHR2Q969V1 340 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 ANKRD9Q96BM1 317 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CMBLQ96DG6 245 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 FAM122AQ96E09 287 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 SEH1LQ96EE3 360 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 FBXO17Q96EF6 278 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 FAM210BQ96KR6 192 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 C2orf50Q96LR7 162 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 TGM7Q96PF1 710 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 MYADMQ96S97 322 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CD180Q99467 661 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BLQ99880 126 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 PRRT1Q99946 306 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 NUDT16L1Q9BRJ7 211 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 PYGO2Q9BRQ0 406 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 PCGF1Q9BSM1 259 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 PBDC1Q9BVG4 233 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 ANGPTL4Q9BY76 406 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 SELENOIQ9C0D9 397 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR8D2Q9GZM6 311 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR2AG1Q9H205 316 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 RHBGQ9H310 441 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 HRH4Q9H3N8 390 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 DPEP2Q9H4A9 486 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM231Q9H6L2 316 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 BPIFA1Q9NP55 256 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 CHST11Q9NPF2 352 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 KCNJ16Q9NPI9 418 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 DMRT3Q9NQL9 472 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 FAM212BQ9NTI7 297 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 SIDT1Q9NXL6 827 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 KLHL28Q9NXS3 571 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 USP36Q9P275 1121 aaKnown RBP3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 DKKL1Q9UK85 242 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 AMDHD2Q9Y303 409 aa3.63□□□□□ -1.83
HMGB1P50-201ENST00000605814 PLXND1Q9Y4D7 1925 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 TNS1Q9HBL0 1735 aaKnown RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 TSPAN11A1L157 253 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF726A6NNF4 738 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 FAM171A2A8MVW0 826 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 HSBP1L1C9JCN9 74 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 F5H5T6 163 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PRAMEF26H0Y7S4 382 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 H0YIZ8 118 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 RAB27BO00194 218 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 CDC40O60508 579 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 DFFBO76075 338 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 LYPD3O95274 346 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC2A10O95528 541 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC16A8O95907 504 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 AGR2O95994 175 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 CLTBP09497 229 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PET100P0DJ07 73 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 RD3LP0DJH9 198 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 NR2F1P10589 423 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 CTSAP10619 480 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ATP1B2P14415 290 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 IL9P15248 144 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 GYPEP15421 78 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 NPPBP16860 134 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ADRA2CP18825 462 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 BCKDHBP21953 392 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PBLDP30039 288 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 APOBEC3AP31941 199 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 GNALP38405 381 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 GPR3P46089 330 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR1G1P47890 313 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PGFP49763 221 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 KHKP50053 298 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 GNG10P50151 68 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 NPY4RP50391 375 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms