RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 SLC35D3Q5M8T2 416 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 OR2T2Q6IF00 324 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 CXXC5Q7LFL8 322 aaKnown RBP13.37□□□□□ -0.27
RPS28-203ENST00000600659 PRSS45Q7RTY3 260 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 RNF133Q8WVZ7 376 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 OTULINQ96BN8 352 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 CYSLTR2Q9NS75 346 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 KLHDC2Q9Y2U9 406 aa13.37□□□□□ -0.27
RPS28-203ENST00000600659 IQCF6A8MYZ5 107 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 ZNF878C9JN71 531 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 INAFM1C9JVW0 142 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 RBMXP38159 391 aaKnown RBP13.36□□□□□ -0.27
RPS28-203ENST00000600659 LIPAP38571 399 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 OPRL1P41146 370 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 TPTEP56180 551 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 EIF2B1Q14232 305 aaKnown RBP13.36□□□□□ -0.27
RPS28-203ENST00000600659 GK2Q14410 553 aaPredicted RBP13.36□□□□□ -0.27
RPS28-203ENST00000600659 KLHL12Q53G59 568 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 C6orf52Q5T4I8 152 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 ZFP1Q6P2D0 407 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 USP51Q70EK9 711 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 BCDIN3DQ7Z5W3 292 aaKnown RBP13.36□□□□□ -0.27
RPS28-203ENST00000600659 OR5AS1Q8N127 324 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 OTOSQ8NHW6 89 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 POM121Q96HA1 1249 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 KCNJ15Q99712 375 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 SAP30LQ9HAJ7 183 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 DCAF16Q9NXF7 216 aa13.36□□□□□ -0.27
RPS28-203ENST00000600659 IGHV1-69-2A0A0G2JMI3 117 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 PLSCR5A0PG75 271 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 PRR32B1ATL7 298 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 MLNRO43193 412 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 CDC14BO60729 498 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 LCATP04180 440 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 ALPLP05186 524 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 SLC2A1P11166 492 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 NAA10P41227 235 aaPredicted RBP13.35□□□□□ -0.27
RPS28-203ENST00000600659 APOFQ13790 326 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 AADACL4Q5VUY2 407 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 DRAM2Q6UX65 266 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 SPATC1Q76KD6 591 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 OR5L1Q8NGL2 311 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 OR2AE1Q8NHA4 323 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 C1orf159Q96HA4 380 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 COPS4Q9BT78 406 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 USE1Q9NZ43 259 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 ZDHHC8Q9ULC8 765 aa13.35□□□□□ -0.27
RPS28-203ENST00000600659 MT-ND5P03915 603 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 ZNF16P17020 682 aaPredicted RBP13.34□□□□□ -0.27
RPS28-203ENST00000600659 PRKXP51817 358 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 TMEM33P57088 247 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 ZNF92Q03936 586 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 GLYATL3Q5SZD4 288 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 RHOUQ7L0Q8 258 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 SHFQ7M4L6 423 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 TCEANCQ8N8B7 351 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 OR8G5Q8NG78 346 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 SPTSSAQ969W0 71 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 MSI2Q96DH6 328 aaKnown RBP13.34□□□□□ -0.27
RPS28-203ENST00000600659 PLEKHA8Q96JA3 519 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 DIRC2Q96SL1 478 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 TEAD3Q99594 435 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 SLC30A2Q9BRI3 323 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 S100A14Q9HCY8 104 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 CENPMQ9NSP4 180 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 ZNF319Q9P2F9 582 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 COPS3Q9UNS2 423 aa13.34□□□□□ -0.27
RPS28-203ENST00000600659 H0YL77 283 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 EI24O14681 340 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 TLX2O43763 284 aaPredicted RBP13.33□□□□□ -0.28
RPS28-203ENST00000600659 ALOX5APP20292 161 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 GPR6P46095 362 aaPredicted RBP13.33□□□□□ -0.28
RPS28-203ENST00000600659 SLC6A9P48067 706 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 HCCSP53701 268 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 GRB2P62993 217 aaKnown RBP13.33□□□□□ -0.28
RPS28-203ENST00000600659 ZMAT1Q5H9K5 638 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 RFLNBQ8N5W9 214 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 BHLHE23Q8NDY6 225 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 OR2Z1Q8NG97 314 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 CLDND2Q8NHS1 167 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 TMEM163Q8TC26 289 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 SPSB4Q96A44 273 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 ELMOD3Q96FG2 381 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 RBM4BQ9BQ04 359 aaKnown RBP13.33□□□□□ -0.28
RPS28-203ENST00000600659 REPIN1Q9BWE0 567 aaKnown RBP13.33□□□□□ -0.28
RPS28-203ENST00000600659 TREM2Q9NZC2 230 aa13.33□□□□□ -0.28
RPS28-203ENST00000600659 JMJD1CQ15652 2540 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 LYNP07948 512 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 CX3CR1P49238 355 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 TNFAIP6P98066 277 aaPredicted RBP13.32□□□□□ -0.28
RPS28-203ENST00000600659 NXNL2Q5VZ03 156 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 SLC16A9Q7RTY1 509 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 ZNF283Q8N7M2 679 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 ZNF454Q8N9F8 522 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 OR10AD1Q8NGE0 317 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 ITLN1Q8WWA0 313 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 SIGLEC11Q96RL6 698 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 TEX12Q9BXU0 123 aa13.32□□□□□ -0.28
RPS28-203ENST00000600659 TOR3AQ9H497 397 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms