RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 PRR32B1ATL7 298 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 PSMD9O00233 223 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 CD8AP01732 235 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 KRT8P05787 483 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 ANXA2P07355 339 aaKnown RBP12.33□□□□□ -0.44
VRK3-213ENST00000597215 MYF6P23409 242 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 DCTDP32321 178 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 PSMA6P60900 246 aaKnown RBP12.33□□□□□ -0.44
VRK3-213ENST00000597215 MALLQ13021 153 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 SWI5Q1ZZU3 235 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 MBNL2Q5VZF2 373 aaKnown RBP12.33□□□□□ -0.44
VRK3-213ENST00000597215 SSX6Q7RTT6 188 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 NAA40Q86UY6 237 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 ACBD7Q8N6N7 88 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 KLF14Q8TD94 323 aaPredicted RBP12.33□□□□□ -0.44
VRK3-213ENST00000597215 IGFBPL1Q8WX77 278 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 MRPL48Q96GC5 212 aaKnown RBP12.33□□□□□ -0.44
VRK3-213ENST00000597215 MYCBPQ99417 103 aaPredicted RBP12.33□□□□□ -0.44
VRK3-213ENST00000597215 SYT3Q9BQG1 590 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 POFUT1Q9H488 388 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 INPP5EQ9NRR6 644 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 PTTG3PQ9NZH4 202 aa12.33□□□□□ -0.44
VRK3-213ENST00000597215 ANKRD17O75179 2603 aaKnown RBP12.33□□□□□ -0.44
VRK3-213ENST00000597215 IGLV3-9A0A075B6K5 115 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 A0A1W2PPW3 197 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 TMEM129A0AVI4 362 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 SLC2A1P11166 492 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 MPV17P39210 176 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 ZNF121P58317 390 aaPredicted RBP12.32□□□□□ -0.44
VRK3-213ENST00000597215 ZNF85Q03923 595 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 MOGQ16653 247 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 MST1LQ2TV78 715 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 ZNF829Q3KNS6 432 aaPredicted RBP12.32□□□□□ -0.44
VRK3-213ENST00000597215 SNAI3Q3KNW1 292 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 FBXW12Q6X9E4 464 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 PLEKHG7Q6ZR37 379 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 LRP11Q86VZ4 500 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 OR52I1Q8NGK6 324 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 SNX33Q8WV41 574 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 MBD6Q96DN6 1003 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 CACNG6Q9BXT2 260 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 Q9H521 79 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 FGF20Q9NP95 211 aaPredicted RBP12.32□□□□□ -0.44
VRK3-213ENST00000597215 DYNLRB1Q9NP97 96 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 BEX4Q9NWD9 120 aaPredicted RBP12.32□□□□□ -0.44
VRK3-213ENST00000597215 MRM2Q9UI43 246 aaKnown RBP12.32□□□□□ -0.44
VRK3-213ENST00000597215 GPR160Q9UJ42 338 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 N6AMT1Q9Y5N5 214 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 PMF1-BGLAPU3KQ54 211 aa12.32□□□□□ -0.44
VRK3-213ENST00000597215 ARFGEF3Q5TH69 2177 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 EFCAB10A6NFE3 127 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 METTL15A6NJ78 407 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 ACOD1A6NK06 481 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 OVOL3O00110 214 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 TBX1O43435 398 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 XRCC2O43543 280 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 FAM20BO75063 409 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 SULT1C4O75897 302 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 CLPTM1O96005 669 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 IGHV3-13P01766 116 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 IGHA1P01876 353 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 PIPP12273 146 aaPredicted RBP12.31□□□□□ -0.44
VRK3-213ENST00000597215 RAC2P15153 192 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 ACTA2P62736 377 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 ACTG2P63267 376 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 CSNK2BP67870 215 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 GALEQ14376 348 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 NKPD1Q17RQ9 610 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 C6orf141Q5SZD1 244 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 ZNF684Q5T5D7 378 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 LAIR2Q6ISS4 152 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 FAM57BQ71RH2 274 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 PRSS45Q7RTY3 260 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 MRPL21Q7Z2W9 205 aaKnown RBP12.31□□□□□ -0.44
VRK3-213ENST00000597215 FAM220AQ7Z4H9 259 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 YIPF7Q8N8F6 280 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 BPIFB6Q8NFQ5 453 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 OR52H1Q8NGJ2 320 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 HAVCR1Q96D42 359 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 CMBLQ96DG6 245 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 PGAM5Q96HS1 289 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 CNBD2Q96M20 576 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 JAM3Q9BX67 310 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 OR10A2Q9H208 303 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 OPA3Q9H6K4 179 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 BRD7Q9NPI1 651 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 PLCXD1Q9NUJ7 323 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 CNOT2Q9NZN8 540 aaKnown RBP12.31□□□□□ -0.44
VRK3-213ENST00000597215 TAAR3PQ9P1P4 343 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 MYRFQ9Y2G1 1151 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 CSMD2Q7Z408 3487 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 POLQO75417 2590 aa12.31□□□□□ -0.44
VRK3-213ENST00000597215 TMEM269A0A1B0GVZ9 245 aa12.3□□□□□ -0.44
VRK3-213ENST00000597215 H7C417 338 aa12.3□□□□□ -0.44
VRK3-213ENST00000597215 M0R233 179 aa12.3□□□□□ -0.44
VRK3-213ENST00000597215 MAGEB4O15481 346 aaPredicted RBP12.3□□□□□ -0.44
VRK3-213ENST00000597215 XPNPEP2O43895 674 aa12.3□□□□□ -0.44
VRK3-213ENST00000597215 TIMM8AO60220 97 aaPredicted RBP12.3□□□□□ -0.44
VRK3-213ENST00000597215 TACSTD2P09758 323 aa12.3□□□□□ -0.44
VRK3-213ENST00000597215 DCKP27707 260 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms