RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 HCAR1Q9BXC0 346 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 SIRPDQ9H106 197 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 RERGLQ9H628 205 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 SIGLEC7Q9Y286 467 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 ZNF281Q9Y2X9 895 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 A0A0U1RQK1 487 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 EDF1O60869 148 aaKnown RBP8.24□□□□□ -1.09
LIG1-209ENST00000596104 PTP4A3O75365 173 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 NDUFB2O95178 105 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 PTBP3O95758 552 aaKnown RBP8.24□□□□□ -1.09
LIG1-209ENST00000596104 TXNDC12O95881 172 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 ACSM4P0C7M7 580 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 CDKN2AP42771 156 aaKnown RBP8.24□□□□□ -1.09
LIG1-209ENST00000596104 IER3P46695 156 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 FXYD6P3P58550 94 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 COX10Q12887 443 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 CD276Q5ZPR3 534 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 CORO6Q6QEF8 472 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 Q6ZSV7 163 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 TSEN54Q7Z6J9 526 aaKnown RBP8.24□□□□□ -1.09
LIG1-209ENST00000596104 ADCK1Q86TW2 530 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 ZSCAN4Q8NAM6 433 aaPredicted RBP8.24□□□□□ -1.09
LIG1-209ENST00000596104 GJC3Q8NFK1 279 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 OR2T12Q8NG77 320 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 LZICQ8WZA0 190 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 TSSK2Q96PF2 358 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 TRIM15Q9C019 465 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 MMADHCQ9H3L0 296 aaPredicted RBP8.24□□□□□ -1.09
LIG1-209ENST00000596104 TCF7L1Q9HCS4 588 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 UFSP2Q9NUQ7 469 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 INTS9Q9NV88 658 aaKnown RBP8.24□□□□□ -1.09
LIG1-209ENST00000596104 KIF17Q9P2E2 1029 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 GMPR2Q9P2T1 348 aaKnown RBP8.24□□□□□ -1.09
LIG1-209ENST00000596104 ERVK-18Q9QC07 812 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 RNF7Q9UBF6 113 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 RPS6KA6Q9UK32 745 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 TMEM5Q9Y2B1 443 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 POLR1DQ9Y2S0 133 aa8.24□□□□□ -1.09
LIG1-209ENST00000596104 IGLV1-36A0A0B4J1U3 117 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 A0A0G2JND7 137 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 ELOVL7A1L3X0 281 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 BBIP1A8MTZ0 92 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 C3orf80F5H4A9 247 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 SOCS2O14508 198 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 ADAM20O43506 726 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 PPP1R3DO95685 299 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 DBPQ10586 325 aaPredicted RBP8.23□□□□□ -1.09
LIG1-209ENST00000596104 KLF10Q13118 480 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 FBLN7Q53RD9 439 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 METTL11BQ5VVY1 283 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 SFRP4Q6FHJ7 346 aaPredicted RBP8.23□□□□□ -1.09
LIG1-209ENST00000596104 SLC18B1Q6NT16 456 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 PGM2L1Q6PCE3 622 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 CFAP77Q6ZQR2 320 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.23□□□□□ -1.09
LIG1-209ENST00000596104 NAA40Q86UY6 237 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 PIP4P2Q8N4L2 257 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 PNLDC1Q8NA58 520 aaKnown RBP8.23□□□□□ -1.09
LIG1-209ENST00000596104 SLC26A10Q8NG04 563 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 SLC7A13Q8TCU3 470 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 LHX4Q969G2 390 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
LIG1-209ENST00000596104 SIKE1Q9BRV8 207 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 NDEL1Q9GZM8 345 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 ANKRD19PQ9H560 264 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 C16orf95Q9H693 158 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 FN3KRPQ9HA64 309 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 PNRC2Q9NPJ4 139 aaKnown RBP8.23□□□□□ -1.09
LIG1-209ENST00000596104 IER3IP1Q9Y5U9 82 aa8.23□□□□□ -1.09
LIG1-209ENST00000596104 CD300LBA8K4G0 201 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 NDUFA2O43678 99 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 CA6P23280 308 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 MDH1P40925 334 aaKnown RBP8.22□□□□□ -1.09
LIG1-209ENST00000596104 OMPP47874 163 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 ARF6P62330 175 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 OR8G1Q15617 311 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 KCNJ8Q15842 424 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 C11orf91Q3C1V1 193 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 IFI44LQ53G44 452 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 HIST2H2BDQ6DRA6 164 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 DPY19L2P2Q6ZN68 376 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 GDPGP1Q6ZNW5 385 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 CBLL1Q75N03 491 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 OR6V1Q8N148 313 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 PLPP7Q8NBV4 271 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 FAM110DQ8TAY7 271 aaPredicted RBP8.22□□□□□ -1.09
LIG1-209ENST00000596104 SLCO4A1Q96BD0 722 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 RSRC1Q96IZ7 334 aaKnown RBP8.22□□□□□ -1.09
LIG1-209ENST00000596104 TMEM120AQ9BXJ8 343 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 CMTM6Q9NX76 183 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 B9D1Q9UPM9 204 aa8.22□□□□□ -1.09
LIG1-209ENST00000596104 TRAV38-1A0A0B4J264 116 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 A0A1W2PRQ8 180 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 C5orf63A6NC05 138 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 OOEPA6NGQ2 149 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 F5H5K5 113 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 OR10H3O60404 316 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 TSPAN9O75954 239 aa8.21□□□□□ -1.1
LIG1-209ENST00000596104 ZNF682O95780 498 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms