RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 DBPQ10586 325 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 MTX3Q5HYI7 312 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 CYP2R1Q6VVX0 501 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 FOXL2NBQ6ZUU3 175 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 ZDHHC21Q8IVQ6 265 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 ARHGAP24Q8N264 748 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 ZNF420Q8TAQ5 688 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 Q96M85 177 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 ZNF570Q96NI8 536 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 NDEL1Q9GZM8 345 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 C16orf95Q9H693 158 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 SIAEQ9HAT2 523 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 KRCC1Q9NPI7 259 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 NRIP3Q9NQ35 241 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 NECAP2Q9NVZ3 263 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 GRHPRQ9UBQ7 328 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 AURKCQ9UQB9 309 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 TET2Q6N021 2002 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 TEX13CA0A0J9YWL9 993 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 IGHV3-64DA0A0J9YX35 117 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 TCRBV5S2A0A599 114 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 CYB5R3P00387 301 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 ZNF32P17041 273 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 RRM2P31350 389 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 IER3P46695 156 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 SMIM11AP58511 58 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 BPIFB3P59826 476 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 FAM201AQ5SY85 155 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 LCN8Q6JVE9 175 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 LYPD2Q6UXB3 125 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 ZER1Q7Z7L7 766 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 MUC20Q8N307 709 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 PPP1R14AQ96A00 147 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 RASD2Q96D21 266 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 NEIL1Q96FI4 390 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 RBP7Q96R05 134 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 TMEM246Q9BRR3 403 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 MUC13Q9H3R2 512 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 POFUT1Q9H488 388 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 TOR3AQ9H497 397 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 ACOXLQ9NUZ1 547 aa11.4□□□□□ -0.58
SHKBP1-208ENST00000595726 DYNC2H1Q8NCM8 4307 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 A0A0U1RQK1 487 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 A0A1W2PPL8 197 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 UNC119BA6NIH7 251 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 C22orf46C9J442 243 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 XKRYO14609 159 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 TNFSF4P23510 183 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 SDHAP31040 664 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 MAGEA2P43356 314 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 GDI2P50395 445 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 PSG4Q00888 419 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 KRR1Q13601 381 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 SGCAQ16586 387 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 ZMAT1Q5H9K5 638 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 FAM27BQ5VT28 67 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 FANK1Q8TC84 345 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 BCAS4Q8TDM0 211 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 PLEKHA8Q96JA3 519 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 OR2V2Q96R30 315 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 TBX15Q96SF7 602 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 C1orf21Q9H246 121 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 KCNN2Q9H2S1 579 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 GCM1Q9NP62 436 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 CCNB1IP1Q9NPC3 277 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 TAS2R1Q9NYW7 299 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 SACSQ9NZJ4 4579 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 CGGBP1Q9UFW8 167 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 MIOXQ9UGB7 285 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 PRPF19Q9UMS4 504 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 SIGLEC9Q9Y336 463 aa11.39□□□□□ -0.59
SHKBP1-208ENST00000595726 PRSS37A4D1T9 235 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 GPR37O15354 613 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 AHCYL1O43865 530 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 OR10H3O60404 316 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 MPIG6BO95866 241 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 CST2P09228 141 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 CTLA4P16410 223 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 MSR1P21757 451 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 FPR3P25089 353 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 LAP3P28838 519 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 CFHR2P36980 270 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 PITPNBP48739 271 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 MMP16P51512 607 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 MS4A2Q01362 244 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 TRIM25Q14258 630 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 GPR139Q6DWJ6 353 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 SMARCD3Q6STE5 483 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 DPY19L2P2Q6ZN68 376 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 DHFR2Q86XF0 187 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 PDZD9Q8IXQ8 264 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 GATAD2BQ8WXI9 593 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 ASB9Q96DX5 294 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 OR52D1Q9H346 318 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 POLE4Q9NR33 117 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 IL19Q9UHD0 177 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 IER3IP1Q9Y5U9 82 aa11.38□□□□□ -0.59
SHKBP1-208ENST00000595726 LYVE1Q9Y5Y7 322 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms