RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 MFGE8Q08431 387 aaPredicted RBP13.1□□□□□ -0.31
ATG4D-211ENST00000589753 SNTB2Q13425 540 aaKnown RBP13.1□□□□□ -0.31
ATG4D-211ENST00000589753 TBCEQ15813 527 aaPredicted RBP13.1□□□□□ -0.31
ATG4D-211ENST00000589753 COLCA1Q6ZS62 124 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 RFPL4BQ6ZWI9 263 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 FAM57BQ71RH2 274 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 PRSS45Q7RTY3 260 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 KLBQ86Z14 1044 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 SPARTQ8N0X7 666 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 SVOPQ8N4V2 548 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 ZNF485Q8NCK3 441 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 NUP37Q8NFH4 326 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 KBTBD8Q8NFY9 601 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 TSPAN14Q8NG11 270 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 PGAM5Q96HS1 289 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 TMEM204Q9BSN7 226 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 MOB1AQ9H8S9 216 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 BABAM2Q9NXR7 383 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 POU2F3Q9UKI9 436 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 GTF2A1LQ9UNN4 478 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 ATP23Q9Y6H3 246 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 TBX1O43435 398 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 PLAUP00749 431 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 LCKP06239 509 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 NKX6-1P78426 367 aaPredicted RBP13.09□□□□□ -0.31
ATG4D-211ENST00000589753 EMX1Q04741 257 aaPredicted RBP13.09□□□□□ -0.31
ATG4D-211ENST00000589753 MED22Q15528 200 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 PRR14LQ5THK1 2151 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 ZNF544Q6NX49 715 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 FDX2Q6P4F2 183 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 CATSPERDQ86XM0 798 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 C1orf174Q8IYL3 243 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 OR52H1Q8NGJ2 320 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 OR5L1Q8NGL2 311 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 OR1J1Q8NGS3 322 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 RNF166Q96A37 237 aaPredicted RBP13.09□□□□□ -0.31
ATG4D-211ENST00000589753 COG8Q96MW5 612 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 OR5M11Q96RB7 305 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 PBOV1Q9GZY1 135 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 OR10A2Q9H208 303 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 ACOT13Q9NPJ3 140 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 TRIM36Q9NQ86 728 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 G6PC2Q9NQR9 355 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 OR52A1Q9UKL2 312 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 LSM2Q9Y333 95 aaKnown RBP13.09□□□□□ -0.31
ATG4D-211ENST00000589753 STARD10Q9Y365 291 aa13.09□□□□□ -0.31
ATG4D-211ENST00000589753 A0A087WXM4 84 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 E9PI62 339 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 TUBG1P23258 451 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 ANOS1P23352 680 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 GLRXP35754 106 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 TGM4P49221 684 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 PPP1CBP62140 327 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 RPS23P62266 143 aaKnown RBP13.08□□□□□ -0.32
ATG4D-211ENST00000589753 MALLQ13021 153 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 SPHARQ15513 63 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 CCDC58Q4VC31 144 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 BCL2L15Q5TBC7 163 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF704Q6ZNC4 412 aaPredicted RBP13.08□□□□□ -0.32
ATG4D-211ENST00000589753 OR8B12Q8NGG6 310 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 OR2G2Q8NGZ5 317 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 TUBG2Q9NRH3 451 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 ZNF319Q9P2F9 582 aa13.08□□□□□ -0.32
ATG4D-211ENST00000589753 NUFIP1Q9UHK0 495 aaKnown RBP13.08□□□□□ -0.32
ATG4D-211ENST00000589753 FAM221AA4D161 298 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 C5orf63A6NC05 138 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 XRCC2O43543 280 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 GPRIN2O60269 458 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 ATE1O95260 518 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 LALBAP00709 142 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 PCMT1P22061 227 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 CCR9P51686 369 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 GTF2A1P52655 376 aaPredicted RBP13.07□□□□□ -0.32
ATG4D-211ENST00000589753 TAS2R43P59537 309 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 NANOS3P60323 173 aaKnown RBP13.07□□□□□ -0.32
ATG4D-211ENST00000589753 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 ACSM1Q08AH1 577 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 ALKBH1Q13686 389 aaKnown RBP13.07□□□□□ -0.32
ATG4D-211ENST00000589753 TIGD6Q17RP2 521 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 WDR38Q5JTN6 314 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 GLYATL3Q5SZD4 288 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 SPATA46Q5T0L3 261 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 XAF1Q6GPH4 301 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 RGS7BPQ6MZT1 257 aaPredicted RBP13.07□□□□□ -0.32
ATG4D-211ENST00000589753 RPL22L1Q6P5R6 122 aaKnown RBP13.07□□□□□ -0.32
ATG4D-211ENST00000589753 VHLLQ6RSH7 139 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 ELMOD2Q8IZ81 293 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 PRSS35Q8N3Z0 413 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 SLC25A40Q8TBP6 338 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 NEUROG1Q92886 237 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 PPP1R14AQ96A00 147 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 POFUT1Q9H488 388 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 CA10Q9NS85 328 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 PTTG3PQ9NZH4 202 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 FRRS1LQ9P0K9 344 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 SLC22A13Q9Y226 551 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 ADGRG4Q8IZF6 3080 aa13.07□□□□□ -0.32
ATG4D-211ENST00000589753 TRBV2A0A0J9YWF9 115 aa13.06□□□□□ -0.32
ATG4D-211ENST00000589753 MAGEA13PA6NCF6 341 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms