RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 TFAP2EQ6VUC0 442 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 MS4A7Q9GZW8 240 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 LMAN1LQ9HAT1 526 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 TMEM202A6NGA9 273 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 KRTDAPP60985 99 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 ERV3-1Q14264 604 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 SMAD2Q15796 467 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 TRMT12Q53H54 448 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 USP53Q70EK8 1073 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 LINC00518Q8N0U6 118 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 ZNF784Q8NCA9 323 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 ABHD5Q8WTS1 349 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 CHAC2Q8WUX2 184 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 RSRP1Q9BUV0 290 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 MED16Q9Y2X0 877 aa13.28□□□□□ -0.28
SMARCA4-214ENST00000589677 A0A1W2PPH5 198 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 C7orf66A4D0T2 115 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 ETFDHQ16134 617 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 ETFRF1Q6IPR1 90 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 GRINAQ7Z429 371 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 ABI3BPQ7Z7G0 1075 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 ORAI1Q96D31 301 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 CACNA1SQ13698 1873 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 XKRY2A2RUG3 117 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 OR5H8P0DN80 308 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 COX5AP20674 150 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 RBP2P50120 134 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.27□□□□□ -0.286e-8■■■■■ 50.8
SMARCA4-214ENST00000589677 BARHL1Q9BZE3 327 aa13.27□□□□□ -0.28
SMARCA4-214ENST00000589677 C9orf170A2RU37 121 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 NPBWR1P48145 328 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 SLC10A1Q14973 349 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 SLC39A5Q6ZMH5 540 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 LINC01465Q8N7H1 131 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 KDF1Q8NAX2 398 aaPredicted RBP13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 SLAMF6Q96DU3 332 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 SIGLEC11Q96RL6 698 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 KCNJ15Q99712 375 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 TMPRSS13Q9BYE2 586 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 NTMQ9P121 344 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 CA14Q9ULX7 337 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 RCL1Q9Y2P8 373 aaKnown RBP13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 MAST2Q6P0Q8 1798 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 NSG1A0A0A6YYJ2 146 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 ZFAND5O76080 213 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 CFIP05156 583 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 CCKARP32238 428 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 PIGPP57054 158 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 FAM209BQ5JX69 171 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 NCMAPQ5T1S8 102 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 RTN4IP1Q8WWV3 396 aaPredicted RBP13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 NUDT9Q9BW91 350 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 S1PR5Q9H228 398 aa13.27□□□□□ -0.29
SMARCA4-214ENST00000589677 PRAMEF26H0Y7S4 382 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 PRAMEF4O60810 478 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 SFT2D2O95562 160 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 RPL29P47914 159 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 TMEM176BQ3YBM2 270 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 PLA1AQ53H76 456 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 FAHD2BQ6P2I3 314 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 Q6ZSR6 202 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 TAS1R1Q7RTX1 841 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 SPNS2Q8IVW8 549 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 OR51E1Q8TCB6 317 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 FAHD2AQ96GK7 314 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 OPN4Q9UHM6 478 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 TRAPPC1Q9Y5R8 145 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 FIGNL2A6NMB9 653 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 PPP1CBP62140 327 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 PPP1R1AQ13522 171 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 AWAT1Q58HT5 328 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 SEZ6L2Q6UXD5 910 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 DEFB119Q8N690 84 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 OR10J5Q8NHC4 309 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 ZNF596Q8TC21 504 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 HEYLQ9NQ87 328 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 OR5V1Q9UGF6 321 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 DAPP1Q9UN19 280 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 H0Y8G0 127 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 DUS4LO95620 317 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 GCH1P30793 250 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 GSK3AP49840 483 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 HTRA3P83110 453 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 INSL4Q14641 139 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 TIGITQ495A1 244 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 TMEM52BQ4KMG9 183 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 METRNLQ641Q3 311 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 GPR32P1Q8NGA4 272 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 PINX1Q96BK5 328 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 INTS12Q96CB8 462 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 SLC22A13Q9Y226 551 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 MMACHCQ9Y4U1 282 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 OPN1LWP04000 364 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 DUSP3P51452 185 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 RTL10Q7L3V2 364 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 ZNF383Q8NA42 475 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 ARRDC3Q96B67 414 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 ACAD8Q9UKU7 415 aa13.26□□□□□ -0.29
SMARCA4-214ENST00000589677 A0A1B0GUL6 1792 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms