RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 CCDC159P0C7I6 412 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 DCKP27707 260 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 OPRL1P41146 370 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 RPS27P42677 84 aaKnown RBP12.8□□□□□ -0.36
HDAC5-207ENST00000588261 RPS23P62266 143 aaKnown RBP12.8□□□□□ -0.36
HDAC5-207ENST00000588261 GALK2Q01415 458 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 C11orf71Q6IPW1 123 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 KRT80Q6KB66 452 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 LGALS12Q96DT0 336 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 MRPL48Q96GC5 212 aaKnown RBP12.8□□□□□ -0.36
HDAC5-207ENST00000588261 COG8Q96MW5 612 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 MROQ9BYG7 248 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 BCL2L14Q9BZR8 327 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 FGF20Q9NP95 211 aaPredicted RBP12.8□□□□□ -0.36
HDAC5-207ENST00000588261 TBCCD1Q9NVR7 557 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 CISD1Q9NZ45 108 aaKnown RBP12.8□□□□□ -0.36
HDAC5-207ENST00000588261 AASSQ9UDR5 926 aa12.8□□□□□ -0.36
HDAC5-207ENST00000588261 YLPM1P49750 1951 aaKnown RBP12.8□□□□□ -0.36
HDAC5-207ENST00000588261 HEATR1Q9H583 2144 aaKnown RBP12.79□□□□□ -0.36
HDAC5-207ENST00000588261 LOC100509620A0A075B734 347 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 C5orf49A4QMS7 147 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 EFCAB10A6NFE3 127 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 GPRIN2O60269 458 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 NR4A1P22736 598 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 CALCRP30988 508 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 SMN1Q16637 294 aaKnown RBP12.79□□□□□ -0.36
HDAC5-207ENST00000588261 C6orf141Q5SZD1 244 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 LAIR2Q6ISS4 152 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 SLC22A25Q6T423 547 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 DRAM2Q6UX65 266 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 ZNF679Q8IYX0 411 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
HDAC5-207ENST00000588261 ACBD7Q8N6N7 88 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 THEM6Q8WUY1 208 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 OR8B4Q96RC9 309 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 KCNJ15Q99712 375 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 COPS4Q9BT78 406 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 ZNF442Q9H7R0 627 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 SP140LQ9H930 580 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 ELOVL3Q9HB03 270 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 EIF3KQ9UBQ5 218 aaKnown RBP12.79□□□□□ -0.36
HDAC5-207ENST00000588261 COPS3Q9UNS2 423 aa12.79□□□□□ -0.36
HDAC5-207ENST00000588261 IGHV4-30-2A0A087WSY4 118 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 A8MV72 311 aaPredicted RBP12.78□□□□□ -0.36
HDAC5-207ENST00000588261 ATP6V1G2-DDX39BF2Z307 99 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 H3BSA7 217 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 M0R135 149 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 SULT1C4O75897 302 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 F12P00748 615 aaPredicted RBP12.78□□□□□ -0.36
HDAC5-207ENST00000588261 GLRXP35754 106 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 RAD52P43351 418 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 TPTEP56180 551 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 ACTA2P62736 377 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 ACTG2P63267 376 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 MED21Q13503 144 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 TAF13Q15543 124 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 ZNF544Q6NX49 715 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 TMEM154Q6P9G4 183 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 ZNF322Q6U7Q0 402 aaPredicted RBP12.78□□□□□ -0.36
HDAC5-207ENST00000588261 KCTD20Q7Z5Y7 419 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 OR10H4Q8NGA5 316 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 HAVCR2Q8TDQ0 301 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 ZNF799Q96GE5 643 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 CNBD2Q96M20 576 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 AMELYQ99218 206 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 BARX1Q9HBU1 254 aaPredicted RBP12.78□□□□□ -0.36
HDAC5-207ENST00000588261 AMBNQ9NP70 447 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 FKBP14Q9NWM8 211 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 SCN3BQ9NY72 215 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 PSORS1C1Q9UIG5 152 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 BLOC1S6Q9UL45 172 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 DIMT1Q9UNQ2 313 aaKnown RBP12.78□□□□□ -0.36
HDAC5-207ENST00000588261 KLHDC2Q9Y2U9 406 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 SVEP1Q4LDE5 3571 aa12.78□□□□□ -0.36
HDAC5-207ENST00000588261 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.77□□□□□ -0.362e-6■□□□□ 10.3
HDAC5-207ENST00000588261 A0A1W2PQL4 384 aaPredicted RBP12.77□□□□□ -0.37
HDAC5-207ENST00000588261 ACOD1A6NK06 481 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 SLC1A7O00341 560 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 ABHD16AO95870 558 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 H2BFMP0C1H6 154 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 ACSM4P0C7M7 580 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 HSD11B1P28845 292 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 PSMA6P60900 246 aaKnown RBP12.77□□□□□ -0.37
HDAC5-207ENST00000588261 HGFACQ04756 655 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 RSPO1Q2MKA7 263 aaPredicted RBP12.77□□□□□ -0.37
HDAC5-207ENST00000588261 RBM48Q5RL73 367 aaKnown RBP12.77□□□□□ -0.37
HDAC5-207ENST00000588261 PLEKHG7Q6ZR37 379 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 COLCA1Q6ZS62 124 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 KRT77Q7Z794 578 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.77□□□□□ -0.37
HDAC5-207ENST00000588261 SYS1Q8N2H4 156 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 PAQR4Q8N4S7 273 aaPredicted RBP12.77□□□□□ -0.37
HDAC5-207ENST00000588261 OR52I1Q8NGK6 324 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 APOBEC3DQ96AK3 386 aaPredicted RBP12.77□□□□□ -0.37
HDAC5-207ENST00000588261 C4orf45Q96LM5 186 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 DOK1Q99704 481 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 C1QTNF5Q9BXJ0 243 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 CENPMQ9NSP4 180 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 POU2F3Q9UKI9 436 aa12.77□□□□□ -0.37
HDAC5-207ENST00000588261 EXOSC1Q9Y3B2 195 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms