RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 GPX7Q96SL4 187 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-225ENST00000586385 SH3GL1Q99961 368 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 RASSF4Q9H2L5 321 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 RERGLQ9H628 205 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 PNRC2Q9NPJ4 139 aaKnown RBP9.82□□□□□ -0.84
BRCA1-225ENST00000586385 UFSP2Q9NUQ7 469 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 ACOXLQ9NUZ1 547 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 CMTM6Q9NX76 183 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 DOCK11Q5JSL3 2073 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 A0A0G2JND7 137 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 LGALS8O00214 317 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 SOCS2O14508 198 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 EDF1O60869 148 aaKnown RBP9.81□□□□□ -0.84
BRCA1-225ENST00000586385 TXNDC12O95881 172 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 COX10Q12887 443 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 PDCD1Q15116 288 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 COQ5Q5HYK3 327 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 METTL21CQ5VZV1 264 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 HIST2H2BDQ6DRA6 164 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 SFRP4Q6FHJ7 346 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-225ENST00000586385 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-225ENST00000586385 ZSCAN4Q8NAM6 433 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-225ENST00000586385 OR2T12Q8NG77 320 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 SLC7A13Q8TCU3 470 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 GATAD2BQ8WXI9 593 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 LHX4Q969G2 390 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 FAM46AQ96IP4 442 aaKnown RBP9.81□□□□□ -0.84
BRCA1-225ENST00000586385 HDHD2Q9H0R4 259 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 RPS6KA6Q9UK32 745 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 IER3IP1Q9Y5U9 82 aa9.81□□□□□ -0.84
BRCA1-225ENST00000586385 A0A1B0GW55 424 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 C3orf80F5H4A9 247 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 PPP1R3DO95685 299 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 IFNW1P05000 195 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 DUX4L2P0CJ85 424 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 DUX4L3P0CJ86 424 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 DUX4L4P0CJ87 422 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 DUX4L5P0CJ88 424 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 DUX4L6P0CJ89 424 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 DUX4L7P0CJ90 424 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 OMPP47874 163 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 NPY4RP50391 375 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 ELF3P78545 371 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-225ENST00000586385 KLF10Q13118 480 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 GPR139Q6DWJ6 353 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 SLC18B1Q6NT16 456 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 DUX4L9Q6RFH8 374 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-225ENST00000586385 LINC00346Q8IVM7 164 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 PDZD9Q8IXQ8 264 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 OR6V1Q8N148 313 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 SLC26A10Q8NG04 563 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 FAM110DQ8TAY7 271 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-225ENST00000586385 TBC1D15Q8TC07 691 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 DYDC1Q8WWB3 177 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 UBE2FQ969M7 185 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 ERGIC1Q969X5 290 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 SEMA6AQ9H2E6 1030 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 MMADHCQ9H3L0 296 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-225ENST00000586385 C16orf95Q9H693 158 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 TCF7L1Q9HCS4 588 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 INTS9Q9NV88 658 aaKnown RBP9.8□□□□□ -0.84
BRCA1-225ENST00000586385 RNF7Q9UBF6 113 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 DUX4Q9UBX2 424 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 POLR1DQ9Y2S0 133 aa9.8□□□□□ -0.84
BRCA1-225ENST00000586385 ELOVL7A1L3X0 281 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 ADAM20O43506 726 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 OR10H3O60404 316 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 NDUFB2O95178 105 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 NPPAP01160 153 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 LIPFP07098 398 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 IRF2P14316 349 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 CA6P23280 308 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 GGT2P36268 569 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 ARF6P62330 175 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 PRB3Q04118 309 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-225ENST00000586385 POU4F2Q12837 409 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 SEC23BQ15437 767 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 BEAN1Q3B7T3 259 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 ZNF826PQ6ZT77 177 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 ADCK1Q86TW2 530 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 FAM90A1Q86YD7 464 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 GCSAMQ8N6F7 178 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 BOLLQ8N9W6 283 aaKnown RBP9.79□□□□□ -0.84
BRCA1-225ENST00000586385 GJC3Q8NFK1 279 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 OR11L1Q8NGX0 322 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 SLCO4A1Q96BD0 722 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 RSRC1Q96IZ7 334 aaKnown RBP9.79□□□□□ -0.84
BRCA1-225ENST00000586385 HSH2DQ96JZ2 352 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 FUZQ9BT04 418 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 HCAR1Q9BXC0 346 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 TMEM120AQ9BXJ8 343 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 TRIM15Q9C019 465 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 SAR1AQ9NR31 198 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 ADA2Q9NZK5 511 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 ERVK-18Q9QC07 812 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 B9D1Q9UPM9 204 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 ZNF281Q9Y2X9 895 aa9.79□□□□□ -0.84
BRCA1-225ENST00000586385 LOC100653049A0A140TA62 436 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 CD300LBA8K4G0 201 aa9.78□□□□□ -0.84
BRCA1-225ENST00000586385 BBIP1A8MTZ0 92 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms