RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 NTSP30990 170 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 CSKP41240 450 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 KIR2DS4P43632 304 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 RORCP51449 518 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 CCR8P51685 355 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 PAX8Q06710 450 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 CD47Q08722 323 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 COTL1Q14019 142 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 LRRC36Q1X8D7 754 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 C11orf71Q6IPW1 123 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 ADNP2Q6IQ32 1131 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 CNIH2Q6PI25 160 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 PRSS41Q7RTY9 318 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 NT5DC3Q86UY8 548 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 METTL13Q8N6R0 699 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 OR51F2Q8NH61 342 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 SPATA3Q8NHX4 192 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 FGF14Q92915 247 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 C18orf12Q96KH6 178 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 DUX3Q96PT4 197 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 RANBP9Q96S59 729 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 BARHL1Q9BZE3 327 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 C20orf85Q9H1P6 137 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 ANKHQ9HCJ1 492 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 ZNF275Q9NSD4 429 aaPredicted RBP4.97□□□□□ -1.61
TPM4-203ENST00000586193 TXLNGQ9NUQ3 528 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 CALYQ9NYX4 217 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 POFUT2Q9Y2G5 429 aa4.97□□□□□ -1.61
TPM4-203ENST00000586193 PHF3Q92576 2039 aaKnown RBP4.97□□□□□ -1.61
TPM4-203ENST00000586193 RAD51CO43502 376 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 KLK1P06870 262 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 PSMC3P17980 439 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 GCLMP48507 274 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 MARCKSL1P49006 195 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 SELENOTP62341 195 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 GTF2BQ00403 316 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 SP4Q02446 784 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 SLC25A11Q02978 314 aaKnown RBP4.96□□□□□ -1.62
TPM4-203ENST00000586193 TGFBR3Q03167 851 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 STX3Q13277 289 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 TTMPQ5BVD1 217 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 OR2B11Q5JQS5 317 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 TPRG1LQ5T0D9 272 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 PRMT9Q6P2P2 845 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 UNQ9370/PRO34162Q6UXP9 181 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 LINC00336Q6ZUF6 198 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 H2AFVQ71UI9 128 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 SELENOHQ8IZQ5 122 aaKnown RBP4.96□□□□□ -1.62
TPM4-203ENST00000586193 CADM2Q8N3J6 435 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 KIF2BQ8N4N8 673 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 DEFB123Q8N688 67 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 TMEM161BQ8NDZ6 487 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 BAALCQ8WXS3 180 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 MRGPRFQ96AM1 343 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 EEF1AKMT3Q96AZ1 226 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 ALS2CR12Q96Q35 445 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 HIST1H4GQ99525 98 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 OPRPNQ99935 248 aaPredicted RBP4.96□□□□□ -1.62
TPM4-203ENST00000586193 TMEM38AQ9H6F2 299 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 ISG20L2Q9H9L3 353 aaKnown RBP4.96□□□□□ -1.62
TPM4-203ENST00000586193 PATZ1Q9HBE1 687 aaKnown RBP4.96□□□□□ -1.62
TPM4-203ENST00000586193 STMN3Q9NZ72 180 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 UGT2A1Q9Y4X1 527 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 EYSQ5T1H1 3165 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 MCM3APO60318 1980 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 ANK1P16157 1881 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 TRIOBPQ9H2D6 2365 aa4.96□□□□□ -1.62
TPM4-203ENST00000586193 LTBP2Q14767 1821 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 CEP290O15078 2479 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 IGHV3OR16-13A0A075B7E8 117 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 H7C0C1 242 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 GALR3O60755 368 aaPredicted RBP4.95□□□□□ -1.62
TPM4-203ENST00000586193 NDUFS6O75380 124 aaKnown RBP4.95□□□□□ -1.62
TPM4-203ENST00000586193 OXTP01178 125 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 PRPS2P11908 318 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 FOLR1P15328 257 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 NQO2P16083 231 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 HTR2CP28335 458 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 IL12BP29460 328 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 GPR6P46095 362 aaPredicted RBP4.95□□□□□ -1.62
TPM4-203ENST00000586193 UGT2B15P54855 530 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 ZNF92Q03936 586 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 UAP1Q16222 522 aaPredicted RBP4.95□□□□□ -1.62
TPM4-203ENST00000586193 PAN3Q58A45 887 aaKnown RBP4.95□□□□□ -1.62
TPM4-203ENST00000586193 TMIGD1Q6UXZ0 262 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 OR2W3Q7Z3T1 314 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 Q8N377 158 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 ACTRT1Q8TDG2 376 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 TMEM54Q969K7 222 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 VOPP1Q96AW1 172 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 FGGYQ96C11 551 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 ZIM3Q96PE6 472 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 ZNF317Q96PQ6 595 aaPredicted RBP4.95□□□□□ -1.62
TPM4-203ENST00000586193 FRMD8P1Q9BZ68 369 aaPredicted RBP4.95□□□□□ -1.62
TPM4-203ENST00000586193 OR52A5Q9H2C5 316 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 CTPS2Q9NRF8 586 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.95□□□□□ -1.62
TPM4-203ENST00000586193 EXD2Q9NVH0 621 aa4.95□□□□□ -1.62
TPM4-203ENST00000586193 MCUBQ9NWR8 336 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms