RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	CCDC182	A6NF36	153 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	SAC3D1	A6NKF1	404 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	IQCF6	A8MYZ5	107 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	CD5L	O43866	347 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	LILRA1	O75019	489 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	ALPL	P05186	524 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	SLC15A1	P46059	708 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	GRB2	P62993	217 aa	Known RBP	13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	APOF	Q13790	326 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	EIF2B1	Q14232	305 aa	Known RBP	13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	GK2	Q14410	553 aa	Predicted RBP	13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	KLHL12	Q53G59	568 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	TMEM163	Q8TC26	289 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	TEAD3	Q99594	435 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	COPS4	Q9BT78	406 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	SAP30L	Q9HAJ7	183 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	MSL2	Q9HCI7	577 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	S100A14	Q9HCY8	104 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	DECR2	Q9NUI1	292 aa		13.81	□□□□□ -0.2
ERBB2-222	ENST00000584908	MALRD1	Q5VYJ5	2156 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	IGHV1-69-2	A0A0G2JMI3	117 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908		E9PQ18	207 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	SPRY3	O43610	288 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	SELENOF	O60613	162 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	LCAT	P04180	440 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	SELE	P16581	610 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	OPRL1	P41146	370 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	GGTLC2	Q14390	218 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	AADACL4	Q5VUY2	407 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	NXNL2	Q5VZ03	156 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	OR8G5	Q8NG78	346 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	AMELY	Q99218	206 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	YIPF3	Q9GZM5	350 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	EGLN1	Q9GZT9	426 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	CENPM	Q9NSP4	180 aa		13.8	□□□□□ -0.2
ERBB2-222	ENST00000584908	DYSF	O75923	2080 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	TLX2	O43763	284 aa	Predicted RBP	13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	APOC1	P02654	83 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	LYN	P07948	512 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	ANOS1	P23352	680 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	POLR2I	P36954	125 aa	Known RBP	13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	SLC6A9	P48067	706 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	ALDH3A2	P51648	485 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	MALL	Q13021	153 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	TST	Q16762	297 aa	Known RBP	13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	SNAI3	Q3KNW1	292 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	LCN1P1	Q5VSP4	162 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	OR2T2	Q6IF00	324 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	USP51	Q70EK9	711 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908		Q71RC1	249 aa	Predicted RBP	13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	SLC16A9	Q7RTY1	509 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	PRSS45	Q7RTY3	260 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	TCEANC	Q8N8B7	351 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	HPS1	Q92902	700 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	SPSB4	Q96A44	273 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	ELMOD3	Q96FG2	381 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	ZNF582	Q96NG8	517 aa	Predicted RBP	13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	SLC30A2	Q9BRI3	323 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	REPIN1	Q9BWE0	567 aa	Known RBP	13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	IL19	Q9UHD0	177 aa		13.79	□□□□□ -0.2
ERBB2-222	ENST00000584908	SLC22A31	A6NKX4	558 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	EI24	O14681	340 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	IGHV4-31	P0DP07	118 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	ALOX5AP	P20292	161 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	GPR6	P46095	362 aa	Predicted RBP	13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	PRKX	P51817	358 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	CHN2	P52757	468 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	RPS7	P62081	194 aa	Known RBP	13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	TAF13	Q15543	124 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	PGAP1	Q75T13	922 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	MEPCE	Q7L2J0	689 aa	Known RBP	13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	PQLC1	Q8N2U9	271 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	OR13G1	Q8NGZ3	307 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	C1orf159	Q96HA4	380 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	OPA3	Q9H6K4	179 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	HAO2	Q9NYQ3	351 aa		13.78	□□□□□ -0.2
ERBB2-222	ENST00000584908	C5orf63	A6NC05	138 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908		M0R129	80 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	TPD52L2	O43399	206 aa	Known RBP	13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	TNFSF4	P23510	183 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	NAA10	P41227	235 aa	Predicted RBP	13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	CX3CR1	P49238	355 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	GZMK	P49863	264 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	TNFAIP6	P98066	277 aa	Predicted RBP	13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	ZNF92	Q03936	586 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	TRIP10	Q15642	601 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	HFE	Q30201	348 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	SPRN	Q5BIV9	151 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	SPATC1	Q76KD6	591 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	GID4	Q8IVV7	300 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	ZNF283	Q8N7M2	679 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	OR2Z1	Q8NG97	314 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	OR8J1	Q8NGP2	316 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	HRASLS5	Q96KN8	279 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	C9orf16	Q9BUW7	83 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	RIBC2	Q9H4K1	309 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	NIPAL2	Q9H841	368 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	SP140L	Q9H930	580 aa		13.77	□□□□□ -0.21
ERBB2-222	ENST00000584908	KLHDC2	Q9Y2U9	406 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms