RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 PSMD5Q16401 504 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 GUSBP11Q6P575 273 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 FAM71AQ8IYT1 594 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 OR5T1Q8NG75 326 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 OR4M1Q8NGD0 313 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 OR4A4PQ8NGN8 299 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 OR5M1Q8NGP8 315 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 OR6Q1Q8NGQ2 317 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 AKR7LQ8NHP1 331 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 NUBPLQ8TB37 319 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 ECHDC3Q96DC8 303 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 TVP23CQ96ET8 276 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 COL21A1Q96P44 957 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 MYOZ1Q9NP98 299 aaPredicted RBP1.75□□□□□ -2.13
SKA2-210ENST00000584089 MTCH1Q9NZJ7 389 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 PDP1Q9P0J1 537 aaPredicted RBP1.75□□□□□ -2.13
SKA2-210ENST00000584089 CARHSP1Q9Y2V2 147 aaKnown RBP1.75□□□□□ -2.13
SKA2-210ENST00000584089 UBIAD1Q9Y5Z9 338 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 ZNF407Q9C0G0 2248 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 NLRC5Q86WI3 1866 aa1.75□□□□□ -2.13
SKA2-210ENST00000584089 LTBP4Q8N2S1 1624 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 TRBV9A0A0B4J1U6 114 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 TRBV11-1A0A0K0K1C0 115 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 A0A1B0GUH1 482 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 A6NDN8 102 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 NDUFC2-KCTD14E9PQ53 114 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 TNFRSF11BO00300 401 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 TALDO1P37837 337 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 RPS11P62280 158 aaKnown RBP eCLIP1.74□□□□□ -2.13
SKA2-210ENST00000584089 RBX1P62877 108 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 SIGLEC14Q08ET2 396 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 ART3Q13508 389 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 PNOCQ13519 176 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 DGCR6Q14129 220 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 TRAM2Q15035 370 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 NCF4Q15080 339 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 RBMY1FQ15415 496 aaKnown RBP1.74□□□□□ -2.13
SKA2-210ENST00000584089 TTC23LQ6PF05 361 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 SLC22A9Q8IVM8 553 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 OR1J4Q8NGS1 313 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 SLC38A4Q969I6 547 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 WDR34Q96EX3 536 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 TMEM165Q9HC07 324 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 ZNF586Q9NXT0 402 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 ZNF391Q9UJN7 358 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 SIGLEC7Q9Y286 467 aa1.74□□□□□ -2.13
SKA2-210ENST00000584089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.73□□□□□ -2.136e-16■■■■■ 47.1
SKA2-210ENST00000584089 SMIM26A0A096LP01 95 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 A0A1B0GW55 424 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 SYCE1LA8MT33 242 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 C9JVG2 144 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 H7C0C1 242 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 PLPP1O14494 284 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 TAAR5O14804 337 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 LHBP01229 141 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 DUX4L2P0CJ85 424 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 DUX4L3P0CJ86 424 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 DUX4L5P0CJ88 424 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 DUX4L6P0CJ89 424 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 DUX4L7P0CJ90 424 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 IL32P24001 234 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 ATP5OP48047 213 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 SELENBP1Q13228 472 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 ZNF266Q14584 549 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 MRPL23Q16540 153 aaKnown RBP1.73□□□□□ -2.13
SKA2-210ENST00000584089 TPTE2P1Q5T6R2 138 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 C16orf47Q6ZP98 133 aaPredicted RBP1.73□□□□□ -2.13
SKA2-210ENST00000584089 TAS2R42Q7RTR8 314 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 GTPBP8Q8N3Z3 284 aaPredicted RBP1.73□□□□□ -2.13
SKA2-210ENST00000584089 ZNF680Q8NEM1 530 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 CAPSLQ8WWF8 208 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 RASD2Q96D21 266 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 NRBF2Q96F24 287 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 RNF145Q96MT1 663 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 CDX2Q99626 313 aaPredicted RBP1.73□□□□□ -2.13
SKA2-210ENST00000584089 RHOXF2Q9BQY4 288 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 NUP58Q9BVL2 599 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 DHX35Q9H5Z1 703 aaKnown RBP1.73□□□□□ -2.13
SKA2-210ENST00000584089 NEK6Q9HC98 313 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 SLC17A7Q9P2U7 560 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 DUX4Q9UBX2 424 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 SLC17A4Q9Y2C5 497 aa1.73□□□□□ -2.13
SKA2-210ENST00000584089 THADAQ6YHU6 1953 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 SYNJ2BP-COX16A0A087WUM0 186 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 IGHV3OR16-9A0A0B4J2B5 98 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 H7C1H1 209 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 WBP4O75554 376 aaKnown RBP1.72□□□□□ -2.13
SKA2-210ENST00000584089 OR1E1P30953 314 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 OTX1P32242 354 aaPredicted RBP1.72□□□□□ -2.13
SKA2-210ENST00000584089 MPV17P39210 176 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 UBE2E1P51965 193 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 CYP24A1Q07973 514 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 BAMBIQ13145 260 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 MAD2L1BPQ15013 274 aaPredicted RBP1.72□□□□□ -2.13
SKA2-210ENST00000584089 ERO1BQ86YB8 467 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 OR5K2Q8NHB8 316 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 LYPD6BQ8NI32 183 aa1.72□□□□□ -2.13
SKA2-210ENST00000584089 OR51E1Q8TCB6 317 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms