RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 GUSBP11Q6P575 273 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 ZNF880Q6PDB4 577 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 RBM43Q6ZSC3 357 aaKnown RBP1.87□□□□□ -2.11
COPS3-217ENST00000583160 SHISA6Q6ZSJ9 500 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 FAM183BPQ6ZVS7 135 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PHF13Q86YI8 300 aaPredicted RBP1.87□□□□□ -2.11
COPS3-217ENST00000583160 PSTKQ8IV42 348 aaKnown RBP1.87□□□□□ -2.11
COPS3-217ENST00000583160 ARL10Q8N8L6 244 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 TMEM35BQ8NCS4 154 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 OR4K14Q8NGD5 310 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 OR10A7Q8NGE5 316 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 SYNPRQ8TBG9 265 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 SEC22AQ96IW7 307 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 CATSPER2Q96P56 530 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 LYSMD1Q96S90 227 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 DDA1Q9BW61 102 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PLA2G12AQ9BZM1 189 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 RAB33BQ9H082 229 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 DEFB127Q9H1M4 99 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 SPNS1Q9H2V7 528 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 LRRN3Q9H3W5 708 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 LRRC19Q9H756 370 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 UCK1Q9HA47 277 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 FBXO8Q9NRD0 319 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 DDIT4Q9NX09 232 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 MED13Q9UHV7 2174 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 VANGL2Q9ULK5 521 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 GSTK1Q9Y2Q3 226 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 NBASA2RRP1 2371 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 PIEZO2Q9H5I5 2752 aa1.87□□□□□ -2.11
COPS3-217ENST00000583160 CACNA1DQ01668 2161 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 SPTBN1Q01082 2364 aaKnown RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 USP9YO00507 2555 aaPredicted RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 C7orf66A4D0T2 115 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 FAM47DPA6NHR8 397 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 GPR89AB7ZAQ6 455 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 K7ERQ8 282 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 KPNA3O00505 521 aaPredicted RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 SLC31A1O15431 190 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 ZW10O43264 779 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 CXCL13O43927 109 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 IGKV1D-16P01601 117 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 IVLP07476 585 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 RHOCP08134 193 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 H2BFMP0C1H6 154 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 GPR89BP0CG08 455 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 THRAP10827 490 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 UCHL3P15374 230 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 ABOP16442 354 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 CD1CP29017 333 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 HSPA9P38646 679 aaKnown RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 CLDN6P56747 220 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 RPL26P61254 145 aaKnown RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 AP1S1P61966 158 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 KLHL30Q0D2K2 578 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 CYTH1Q15438 398 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 COX19Q49B96 90 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 WDR59Q6PJI9 974 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 CBLN3Q6UW01 205 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 KDM7AQ6ZMT4 941 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 Q6ZN92 141 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 EFL1Q7Z2Z2 1120 aaKnown RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 SLC26A11Q86WA9 606 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 GKN2Q86XP6 184 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 OR4D9Q8NGE8 314 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 NELFBQ8WX92 580 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 HTR3CQ8WXA8 447 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 COX14Q96I36 57 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 PSKH2Q96QS6 385 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 TMEM246Q9BRR3 403 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 TCEAL2Q9H3H9 227 aaPredicted RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 SRMSQ9H3Y6 488 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 WFDC1Q9HC57 220 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 ACP6Q9NPH0 428 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 DYRK4Q9NR20 520 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 QPCTLQ9NXS2 382 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 ZNF222Q9UK12 451 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 DNAJC12Q9UKB3 198 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 HPCAL4Q9UM19 191 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 RPL26L1Q9UNX3 145 aaKnown RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 SLC17A4Q9Y2C5 497 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 DOCK10Q96BY6 2186 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 MN1Q10571 1320 aaPredicted RBP1.86□□□□□ -2.11
COPS3-217ENST00000583160 NUP210LQ5VU65 1888 aa1.86□□□□□ -2.11
COPS3-217ENST00000583160 USP9XQ93008 2570 aaPredicted RBP1.85□□□□□ -2.11
COPS3-217ENST00000583160 IGHV5-10-1A0A0J9YXX1 117 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 PLAC8L1A1L4L8 177 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 RGSL1A5PLK6 1076 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 OR5K4A6NMS3 321 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 TRDCB7Z8K6 153 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 F8VZ95 297 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 RPL36A-HNRNPH2H7BZ11 118 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 PEX7O00628 323 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 NEBLO76041 1014 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 TNFSF15O95150 251 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 MBD3O95983 291 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 SOD1P00441 154 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 TNFP01375 233 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 FGF1P05230 155 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms