RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ZNF75AQ96N20 296 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 AMELYQ99218 206 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 COQ7Q99807 217 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 OR2H1Q9GZK4 316 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 HDHD2Q9H0R4 259 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 VCX3AQ9NNX9 186 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 KCNJ16Q9NPI9 418 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 CRNNQ9UBG3 495 aaPredicted RBP6.97□□□□□ -1.29
COPS3-215ENST00000578317 MRM2Q9UI43 246 aaKnown RBP6.97□□□□□ -1.29
COPS3-215ENST00000578317 SCOCQ9UIL1 159 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 POLR1DQ9Y2S0 133 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 AMDHD2Q9Y303 409 aa6.97□□□□□ -1.29
COPS3-215ENST00000578317 FLNCQ14315 2725 aa6.96□□□□□ -1.29
COPS3-215ENST00000578317 MED12LQ86YW9 2145 aa6.96□□□□□ -1.29
COPS3-215ENST00000578317 UBR5O95071 2799 aaPredicted RBP6.96□□□□□ -1.3
COPS3-215ENST00000578317 OR6C6A6NF89 314 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 PRR32B1ATL7 298 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 ZNF878C9JN71 531 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 MYL12BO14950 172 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 SGCEO43556 437 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 SYNGR3O43761 229 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 RAD51DO75771 328 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 SEC14L2O76054 403 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 WNT11O96014 354 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 HLA-HP01893 362 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 APOC1P02654 83 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 SERPINA5P05154 406 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 CD1AP06126 327 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 IL32P24001 234 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 TGM4P49221 684 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 RIDAP52758 137 aaKnown RBP6.96□□□□□ -1.3
COPS3-215ENST00000578317 NR1H2P55055 460 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 OR12D2P58182 307 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 GRB2P62993 217 aaKnown RBP6.96□□□□□ -1.3
COPS3-215ENST00000578317 SORDQ00796 357 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 TFF3Q07654 80 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 RAB35Q15286 201 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 GSG1Q2KHT4 349 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 TMEM53Q6P2H8 277 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 ZNF367Q7RTV3 350 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 KRT77Q7Z794 578 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.96□□□□□ -1.3
COPS3-215ENST00000578317 WFDC3Q8IUB2 231 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 RFLNBQ8N5W9 214 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 CPEB3Q8NE35 698 aaKnown RBP6.96□□□□□ -1.3
COPS3-215ENST00000578317 IL17RDQ8NFM7 739 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 OR1F12Q8NHA8 337 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 RPS4Y2Q8TD47 263 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 ITLN2Q8WWU7 325 aaPredicted RBP6.96□□□□□ -1.3
COPS3-215ENST00000578317 HTRA1Q92743 480 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 RORBQ92753 470 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 TBX5Q99593 518 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 WNT5BQ9H1J7 359 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 ISG20L2Q9H9L3 353 aaKnown RBP6.96□□□□□ -1.3
COPS3-215ENST00000578317 ELOVL3Q9HB03 270 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 CENPMQ9NSP4 180 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 SLCO1C1Q9NYB5 712 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 PLEK2Q9NYT0 353 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 FBLN5Q9UBX5 448 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 SLC25A15Q9Y619 301 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 ESPL1Q14674 2120 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 DOCK7Q96N67 2140 aa6.96□□□□□ -1.3
COPS3-215ENST00000578317 ZNF503-AS2A6NEH8 195 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 J3QLW9 94 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 OGG1O15527 345 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 IGLV1-44P01699 117 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 H2BFMP0C1H6 154 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 PATE4P0C8F1 98 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 CD79AP11912 226 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 ATP6V1B1P15313 513 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 ZNF14P17017 642 aaPredicted RBP6.95□□□□□ -1.3
COPS3-215ENST00000578317 ZNF19P17023 458 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 CD53P19397 219 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 CRYGSP22914 178 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 MAP2K4P45985 399 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 RPL5P46777 297 aaKnown RBP6.95□□□□□ -1.3
COPS3-215ENST00000578317 ALDH3B2P48448 385 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 CCR9P51686 369 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 GBX2P52951 348 aaPredicted RBP6.95□□□□□ -1.3
COPS3-215ENST00000578317 TAS2R43P59537 309 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 PLP2Q04941 152 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 MLLT11Q13015 90 aaPredicted RBP6.95□□□□□ -1.3
COPS3-215ENST00000578317 TPBGQ13641 420 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 PABPC1L2AQ5JQF8 200 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 OR2G6Q5TZ20 316 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 RPL22L1Q6P5R6 122 aaKnown RBP6.95□□□□□ -1.3
COPS3-215ENST00000578317 TMEM154Q6P9G4 183 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 LRRN1Q6UXK5 716 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.95□□□□□ -1.3
COPS3-215ENST00000578317 SVIPQ8NHG7 77 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 SPRYD4Q8WW59 207 aaPredicted RBP6.95□□□□□ -1.3
COPS3-215ENST00000578317 MUL1Q969V5 352 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 SPTSSAQ969W0 71 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 S100PBPQ96BU1 408 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 MUCL1Q96DR8 90 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 PELI1Q96FA3 418 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 C4orf36Q96KX1 117 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 C16orf92Q96LL3 132 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 OR5M11Q96RB7 305 aa6.95□□□□□ -1.3
COPS3-215ENST00000578317 DCLRE1CQ96SD1 692 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms