RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 SLAMF6Q96DU3 332 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 ZMYND19Q96E35 227 aaPredicted RBP7.33□□□□□ -1.24
SMG6-216ENST00000575176 ZNF799Q96GE5 643 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 CENPNQ96H22 339 aaPredicted RBP7.33□□□□□ -1.24
SMG6-216ENST00000575176 ABHD6Q9BV23 337 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 OSBPL10Q9BXB5 764 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 FGF23Q9GZV9 251 aaPredicted RBP7.33□□□□□ -1.24
SMG6-216ENST00000575176 SEMA6AQ9H2E6 1030 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 YY1AP1Q9H869 796 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 TUBG2Q9NRH3 451 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 TMEM160Q9NX00 188 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 POLR1DQ9Y2S0 133 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 GRIP1Q9Y3R0 1128 aa7.33□□□□□ -1.24
SMG6-216ENST00000575176 DOCK11Q5JSL3 2073 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 IGHV1-69-2A0A0G2JMI3 117 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 hCG_38984A0A1B0GV85 526 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 ZNF593O00488 134 aaPredicted RBP7.32□□□□□ -1.24
SMG6-216ENST00000575176 DLGAP1O14490 977 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 GNGT2O14610 69 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 SPRY3O43610 288 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 TLX2O43763 284 aaPredicted RBP7.32□□□□□ -1.24
SMG6-216ENST00000575176 FCN3O75636 299 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 IFNGP01579 166 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 SLC2A1P11166 492 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 ALOX5APP20292 161 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 FASP25445 335 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 POU1F1P28069 291 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 FMO3P31513 532 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 PMELP40967 661 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 GUCA1AP43080 201 aaPredicted RBP7.32□□□□□ -1.24
SMG6-216ENST00000575176 CENPAP49450 140 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 ECH1Q13011 328 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 MAB21L1Q13394 359 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 TSTQ16762 297 aaKnown RBP7.32□□□□□ -1.24
SMG6-216ENST00000575176 DRAM2Q6UX65 266 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 RHOUQ7L0Q8 258 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 CXXC5Q7LFL8 322 aaKnown RBP7.32□□□□□ -1.24
SMG6-216ENST00000575176 KRT74Q7RTS7 529 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 WDR86Q86TI4 376 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 HIPK1Q86Z02 1210 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 ERI1Q8IV48 349 aaKnown RBP7.32□□□□□ -1.24
SMG6-216ENST00000575176 OR8G5Q8NG78 346 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 OR6N2Q8NGY6 317 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 DACT3Q96B18 629 aaPredicted RBP7.32□□□□□ -1.24
SMG6-216ENST00000575176 INTS14Q96SY0 518 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 MBOAT4Q96T53 435 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 PITX2Q99697 317 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 REPIN1Q9BWE0 567 aaKnown RBP7.32□□□□□ -1.24
SMG6-216ENST00000575176 PPP1R3EQ9H7J1 279 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 SAP30LQ9HAJ7 183 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 ADGRL4Q9HBW9 690 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 KRT84Q9NSB2 600 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 USE1Q9NZ43 259 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 EIF3KQ9UBQ5 218 aaKnown RBP7.32□□□□□ -1.24
SMG6-216ENST00000575176 WIPI2Q9Y4P8 454 aa7.32□□□□□ -1.24
SMG6-216ENST00000575176 SAC3D1A6NKF1 404 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 KIAA1324LA8MWY0 1029 aaPredicted RBP7.31□□□□□ -1.24
SMG6-216ENST00000575176 PRR23D1E9PI22 279 aaPredicted RBP7.31□□□□□ -1.24
SMG6-216ENST00000575176 F5H0A9 414 aaPredicted RBP7.31□□□□□ -1.24
SMG6-216ENST00000575176 F5H5K5 113 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 G3V2T6 193 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 EI24O14681 340 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 TIMM8AO60220 97 aaPredicted RBP7.31□□□□□ -1.24
SMG6-216ENST00000575176 CDC14BO60729 498 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 IGHV2-5P01817 119 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 HLA-DQA2P01906 255 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 PRR23D2P0DMB1 279 aaPredicted RBP7.31□□□□□ -1.24
SMG6-216ENST00000575176 FCGR1AP12314 374 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 GABRB1P18505 474 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 ACKR3P25106 362 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 GCH1P30793 250 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 NAA10P41227 235 aaPredicted RBP7.31□□□□□ -1.24
SMG6-216ENST00000575176 GATA4P43694 442 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 ARHGDIAP52565 204 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 HCCSP53701 268 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 APOFQ13790 326 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 OR8B8Q15620 311 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 CARTPTQ16568 116 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 TUSC1Q2TAM9 212 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 SLC35D3Q5M8T2 416 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 AVPI1Q5T686 147 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 C1orf229Q6ZS94 237 aaPredicted RBP7.31□□□□□ -1.24
SMG6-216ENST00000575176 SSX6Q7RTT6 188 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 OR5AS1Q8N127 324 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 TMEM163Q8TC26 289 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 SNX33Q8WV41 574 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 ITLN1Q8WWA0 313 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 HPS1Q92902 700 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 ELMOD3Q96FG2 381 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 MEGF10Q96KG7 1140 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 LYZL4Q96KX0 146 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 OR2V2Q96R30 315 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 KCNJ15Q99712 375 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 OR51V1Q9H2C8 321 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 GCM1Q9NP62 436 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 G6PC2Q9NQR9 355 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 CYSLTR2Q9NS75 346 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 FAM206AQ9NX38 181 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 ZDHHC8Q9ULC8 765 aa7.31□□□□□ -1.24
SMG6-216ENST00000575176 DSCAML1Q8TD84 2053 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms