RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 F5H0A9 414 aaPredicted RBP14.57□□□□□ -0.08
SMG6-212ENST00000573153 GSC2O15499 205 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 ANPEPP15144 967 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 SELEP16581 610 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 ZNF3P17036 446 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 ZFP36P26651 326 aaKnown RBP14.57□□□□□ -0.08
SMG6-212ENST00000573153 FMO3P31513 532 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 ENTPD1P49961 510 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 MMP16P51512 607 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 TPTEP56180 551 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 ZMYND11Q15326 602 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 ACSM5Q6NUN0 579 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 SLC27A4Q6P1M0 643 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 OR5AS1Q8N127 324 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 OR2Z1Q8NG97 314 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 OR9Q1Q8NGQ5 310 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 TEX47Q8TBZ9 253 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 RAB39BQ96DA2 213 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 CADM1Q9BY67 442 aaKnown RBP14.57□□□□□ -0.08
SMG6-212ENST00000573153 WDR76Q9H967 626 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 MARCH7Q9H992 704 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 DNAJB9Q9UBS3 223 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 WNK2Q9Y3S1 2297 aa14.57□□□□□ -0.08
SMG6-212ENST00000573153 TVP23AA6NH52 213 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 F5H5K5 113 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 IFNL4K9M1U5 179 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 M0R135 149 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 FKBP6O75344 327 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 VENTXO95231 258 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 PNPP00491 289 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 CLUP10909 449 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 PMELP40967 661 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 SEC61A1P61619 476 aaKnown RBP14.56□□□□□ -0.08
SMG6-212ENST00000573153 SPATA24Q86W54 205 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 RFLNBQ8N5W9 214 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 OR10AD1Q8NGE0 317 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 OR51L1Q8NGJ5 315 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 OR13G1Q8NGZ3 307 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 ST7LQ8TDW4 575 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 SPTSSAQ969W0 71 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 SLCO4A1Q96BD0 722 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 NRBF2Q96F24 287 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 ZNF799Q96GE5 643 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 MEGF10Q96KG7 1140 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 ZNF582Q96NG8 517 aaPredicted RBP14.56□□□□□ -0.08
SMG6-212ENST00000573153 OR2V2Q96R30 315 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 HCAR1Q9BXC0 346 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 GCM1Q9NP62 436 aa14.56□□□□□ -0.08
SMG6-212ENST00000573153 PDP1Q9P0J1 537 aaPredicted RBP14.56□□□□□ -0.08
SMG6-212ENST00000573153 LOC105371242A0A075B767 164 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 GNGT2O14610 69 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 ANXA8P13928 327 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 CBX1P83916 185 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 GK2Q14410 553 aaPredicted RBP14.55□□□□□ -0.08
SMG6-212ENST00000573153 TMEM155Q4W5P6 130 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 DRAM2Q6UX65 266 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 RHOUQ7L0Q8 258 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 DCXRQ7Z4W1 244 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 PEG10Q86TG7 708 aaKnown RBP14.55□□□□□ -0.08
SMG6-212ENST00000573153 ZNF511Q8NB15 262 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 DNAJC9Q8WXX5 260 aa14.55□□□□□ -0.08
SMG6-212ENST00000573153 METTL17Q9H7H0 456 aaPredicted RBP14.55□□□□□ -0.08
SMG6-212ENST00000573153 POLR3KQ9Y2Y1 108 aaPredicted RBP14.55□□□□□ -0.08
SMG6-212ENST00000573153 A8MXK9 166 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 H3BN98 237 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 TMEM178BH3BS89 294 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 ZNF593O00488 134 aaPredicted RBP14.54□□□□□ -0.08
SMG6-212ENST00000573153 ATP5HO75947 161 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 FSTL3O95633 263 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 GYPBP06028 91 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 OSMP13725 252 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 RASSF2P50749 326 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 RAD23AP54725 363 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 CDK5Q00535 292 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 PAX2Q02962 417 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 MALLQ13021 153 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 MAB21L1Q13394 359 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 SNAI3Q3KNW1 292 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 SHQ1Q6PI26 577 aaKnown RBP14.54□□□□□ -0.08
SMG6-212ENST00000573153 ZNF771Q7L3S4 317 aaPredicted RBP14.54□□□□□ -0.08
SMG6-212ENST00000573153 LRRC28Q86X40 367 aaPredicted RBP14.54□□□□□ -0.08
SMG6-212ENST00000573153 IQCF1Q8N6M8 205 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 CELF2-AS1Q8N7Q2 184 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 DEFB108BQ8NET1 73 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 UTP4Q969X6 686 aaKnown RBP14.54□□□□□ -0.08
SMG6-212ENST00000573153 DACT3Q96B18 629 aaPredicted RBP14.54□□□□□ -0.08
SMG6-212ENST00000573153 GAL3ST1Q99999 423 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 MMADHCQ9H3L0 296 aaPredicted RBP14.54□□□□□ -0.08
SMG6-212ENST00000573153 NTN4Q9HB63 628 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 PATZ1Q9HBE1 687 aaKnown RBP14.54□□□□□ -0.08
SMG6-212ENST00000573153 MMP26Q9NRE1 261 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 PPP1R3CQ9UQK1 317 aa14.54□□□□□ -0.08
SMG6-212ENST00000573153 ZNF878C9JN71 531 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 F5H5P2 479 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 TRAPPC2LH3BP13 241 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 E2F6O75461 281 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 GLCEO94923 617 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 LCATP04180 440 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 HMGN1P05114 100 aa14.53□□□□□ -0.08
SMG6-212ENST00000573153 SRP14P37108 136 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms