RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 OR5D14Q8NGL3 314 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 PRRT1Q99946 306 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 SDHAF3Q9NRP4 125 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 MYOTQ9UBF9 498 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 SCRG1O75711 98 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 DCDP81605 110 aaKnown RBP20.22■□□□□ 0.83
VPS53-211ENST00000571805 FOXK1P85037 733 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 FAM69BQ5VUD6 431 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 CPEB2Q7Z5Q1 589 aaKnown RBP20.22■□□□□ 0.83
VPS53-211ENST00000571805 ZNF546Q86UE3 836 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 UEVLDQ8IX04 471 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 OR5M9Q8NGP3 310 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 OR13C9Q8NGT0 318 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 UBE2ZQ9H832 354 aaPredicted RBP20.22■□□□□ 0.83
VPS53-211ENST00000571805 FBLN5Q9UBX5 448 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 WIF1Q9Y5W5 379 aa20.22■□□□□ 0.83
VPS53-211ENST00000571805 RAB3AP20336 220 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 ZBTB25P24278 435 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 CD34P28906 385 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 BAMBIQ13145 260 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 ZNF385CQ66K41 422 aaPredicted RBP20.21■□□□□ 0.83
VPS53-211ENST00000571805 OR52W1Q6IF63 320 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 RNF144BQ7Z419 303 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 GALNT11Q8NCW6 608 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 ADPRHL1Q8NDY3 354 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 OR51E1Q8TCB6 317 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 NUDCD2Q8WVJ2 157 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 SLC5A6Q9Y289 635 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 OR5H14A6NHG9 310 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 CLRN1P58418 232 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 C3orf33Q6P1S2 294 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 NOXO1Q8NFA2 376 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 ZBTB8AQ96BR9 441 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 TMEM185BQ9H7F4 350 aa20.21■□□□□ 0.83
VPS53-211ENST00000571805 TMEM14DPA8MWL7 114 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 A8MXK9 166 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 TRAF3IP2O43734 574 aaPredicted RBP20.2■□□□□ 0.82
VPS53-211ENST00000571805 OR2J2O76002 312 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 ZFAND5O76080 213 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 HLA-AP01891 365 aaKnown RBP20.2■□□□□ 0.82
VPS53-211ENST00000571805 LPCAT3Q6P1A2 487 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 OR1S1Q8NH92 325 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 METTL7AQ9H8H3 244 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 SEC61A2Q9H9S3 476 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 COQ3Q9NZJ6 369 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 ZNF814B7Z6K7 855 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 LIPCP11150 499 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 CDAP32320 146 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 RTN4RL2Q86UN3 420 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 SPSB2Q99619 263 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 CST11Q9H112 138 aa20.2■□□□□ 0.82
VPS53-211ENST00000571805 NOP16Q9Y3C1 178 aaKnown RBP20.2■□□□□ 0.82
VPS53-211ENST00000571805 A0A1W2PNR3 127 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 SPDEFO95238 335 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 IL2RAP01589 272 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 IGHG1P01857 330 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 RLN2P04090 185 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 GNB3P16520 340 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 AGTR1P30556 359 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 CD96P40200 585 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 GSK3AP49840 483 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 FGL1Q08830 312 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 TUSC1Q2TAM9 212 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 LCN10Q6JVE6 187 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 GUSBP11Q6P575 273 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 SLC25A47Q6Q0C1 308 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 LYG2Q86SG7 212 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 ANGPTL5Q86XS5 388 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 ZDHHC22Q8N966 263 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 OR2M3Q8NG83 312 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 SOX7Q9BT81 388 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 PFDN2Q9UHV9 154 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 A0A1W2PQM1 296 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 ZNF878C9JN71 531 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 SSX5O60225 188 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 ONECUT2O95948 504 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 FGF2P09038 288 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 HLA-GP17693 338 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 PPP1R1AQ13522 171 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 ZMYND11Q15326 602 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 SMAD2Q15796 467 aaKnown RBP20.19■□□□□ 0.82
VPS53-211ENST00000571805 SMUG1Q53HV7 270 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 OR10R2Q8NGX6 335 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 NUDT16L1Q9BRJ7 211 aaKnown RBP20.19■□□□□ 0.82
VPS53-211ENST00000571805 KCNK7Q9Y2U2 307 aa20.19■□□□□ 0.82
VPS53-211ENST00000571805 SMAD9O15198 467 aaKnown RBP20.18■□□□□ 0.82
VPS53-211ENST00000571805 HOXD4P09016 255 aaPredicted RBP20.18■□□□□ 0.82
VPS53-211ENST00000571805 MGMTP16455 207 aa20.18■□□□□ 0.82
VPS53-211ENST00000571805 ANOS1P23352 680 aa20.18■□□□□ 0.82
VPS53-211ENST00000571805 ZNF93P35789 620 aaPredicted RBP20.18■□□□□ 0.82
VPS53-211ENST00000571805 RHOUQ7L0Q8 258 aa20.18■□□□□ 0.82
VPS53-211ENST00000571805 PDZD9Q8IXQ8 264 aa20.18■□□□□ 0.82
VPS53-211ENST00000571805 DTWD2Q8NBA8 298 aa20.18■□□□□ 0.82
VPS53-211ENST00000571805 OR2AJ1Q8NGZ0 328 aa20.18■□□□□ 0.82
VPS53-211ENST00000571805 SELENOIQ9C0D9 397 aa20.18■□□□□ 0.82
VPS53-211ENST00000571805 MOB1AQ9H8S9 216 aa20.18■□□□□ 0.82
VPS53-211ENST00000571805 GPN3Q9UHW5 284 aaPredicted RBP20.18■□□□□ 0.82
VPS53-211ENST00000571805 RARRES3Q9UL19 164 aa20.18■□□□□ 0.82
VPS53-211ENST00000571805 LOC100509620A0A075B734 347 aa20.17■□□□□ 0.82
VPS53-211ENST00000571805 A0A0D9SG52 128 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms