RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 OR8G5Q8NG78 346 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 GNPDA2Q8TDQ7 276 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 TAF15Q92804 592 aaKnown RBP eCLIP11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 DUX5Q96PT3 197 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 DDOQ99489 341 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 COQ7Q99807 217 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 SLC30A2Q9BRI3 323 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 TMEM165Q9HC07 324 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 SRA1Q9HD15 236 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 TUBG2Q9NRH3 451 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 POLR1DQ9Y2S0 133 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 PPIAL4AQ9Y536 164 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 INSIG2Q9Y5U4 225 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 AQP12BA6NM10 295 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 IQCF6A8MYZ5 107 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 ATP5HO75947 161 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 CCNB2O95067 398 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 WNT2P09544 360 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 EGR1P18146 543 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 TNFRSF1AP19438 455 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 CENPAP49450 140 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 HMGA2P52926 109 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 TSPAN31Q12999 210 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 OR2T5Q6IEZ7 315 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 PGBD2Q6P3X8 592 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 ZNF620Q6ZNG0 422 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 ZBTB46Q86UZ6 589 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 MOGAT3Q86VF5 341 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 AQP12AQ8IXF9 295 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 BPIFB2Q8N4F0 458 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 SPICQ8N5J4 248 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 ATG16L2Q8NAA4 619 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 SDR9C7Q8NEX9 313 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 OR8D4Q8NGM9 314 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 OR2T29Q8NH02 315 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 ST7LQ8TDW4 575 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 APOBEC3DQ96AK3 386 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 MAP6Q96JE9 813 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 SUCNR1Q9BXA5 334 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 HDHD2Q9H0R4 259 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 EGLN3Q9H6Z9 239 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 REEP1Q9H902 201 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 RPRD1BQ9NQG5 326 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 CMYA5Q8N3K9 4069 aa11.59□□□□□ -0.55
GTF3C1-211ENST00000569653 DHRS12A0PJE2 317 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 TRIM77I1YAP6 450 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 J3QW42 95 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 IGHV4-38-2P0DP08 117 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 TNFSF4P23510 183 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 PYCR1P32322 319 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 MDH2P40926 338 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 RGS6P49758 472 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 RASSF2P50749 326 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 PAX8Q06710 450 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 SCGB2A2Q13296 93 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 MAB21L1Q13394 359 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 FLOT2Q14254 428 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 GK3PQ14409 553 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 GK2Q14410 553 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 AWAT1Q58HT5 328 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 ZNF362Q5T0B9 420 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 RPL13AP3Q6NVV1 102 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 DNM1P34Q6PK57 102 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 JAZF1Q86VZ6 243 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 KLHL36Q8N4N3 616 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 C19orf18Q8NEA5 215 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 GJC3Q8NFK1 279 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 OR9Q2Q8NGE9 314 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 OR52L1Q8NGH7 329 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 OR4C15Q8NGM1 316 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 GCDHQ92947 438 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 UTP4Q969X6 686 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 TMEM246Q9BRR3 403 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 IFT27Q9BW83 186 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 RBM4Q9BWF3 364 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 CYB5R1Q9UHQ9 305 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 POMPQ9Y244 141 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 SAMHD1Q9Y3Z3 626 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 AUP1Q9Y679 476 aa11.58□□□□□ -0.56
GTF3C1-211ENST00000569653 VWFP04275 2813 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 IGHV3OR16-10A0A075B7F0 116 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 DNAJC9-AS1A6NH13 148 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 EBAG9O00559 213 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 NOS3P29474 1203 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 CRABP1P29762 137 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 RAD23AP54725 363 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 CLEC12AQ5QGZ9 265 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 SLC35F1Q5T1Q4 408 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 ZNF770Q6IQ21 691 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 LYPD2Q6UXB3 125 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 DOK3Q7L591 496 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 KLBQ86Z14 1044 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 ADGRG5Q8IZF4 528 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 TEX29Q8N6K0 151 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 CYB561A3Q8NBI2 242 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 OR13G1Q8NGZ3 307 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 COG8Q96MW5 612 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 VNN3Q9NY84 501 aa11.57□□□□□ -0.56
GTF3C1-211ENST00000569653 CDH10Q9Y6N8 788 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms