RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ZNF799Q96GE5 643 aa17.14■□□□□ 0.33
CLK3-225ENST00000569063 SLC30A2Q9BRI3 323 aa17.14■□□□□ 0.33
CLK3-225ENST00000569063 DNAJB9Q9UBS3 223 aa17.14■□□□□ 0.33
CLK3-225ENST00000569063 PPP1R3CQ9UQK1 317 aa17.14■□□□□ 0.33
CLK3-225ENST00000569063 PHF1O43189 567 aaPredicted RBP17.13■□□□□ 0.33
CLK3-225ENST00000569063 E2F6O75461 281 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 IGHV2-70P01814 119 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 SPARCP09486 303 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 CBX1P83916 185 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 MALLQ13021 153 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 LINC01590Q5TEZ4 76 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 IQCF1Q8N6M8 205 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 OR6K6Q8NGW6 343 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 SLCO4A1Q96BD0 722 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 GAL3ST1Q99999 423 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 CADM1Q9BY67 442 aaKnown RBP17.13■□□□□ 0.33
CLK3-225ENST00000569063 GCM1Q9NP62 436 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 DCAF16Q9NXF7 216 aa17.13■□□□□ 0.33
CLK3-225ENST00000569063 PLPP2O43688 288 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 ANXA8P13928 327 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 DRAM2Q6UX65 266 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 HS3ST5Q8IZT8 346 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 BHLHE23Q8NDY6 225 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 SPATA3Q8NHX4 192 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 ST7LQ8TDW4 575 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 SIGLEC11Q96RL6 698 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 ZNF556Q9HAH1 456 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 G6PC2Q9NQR9 355 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 TMEM100Q9NV29 134 aa17.12■□□□□ 0.33
CLK3-225ENST00000569063 ISPDA4D126 451 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 FAM183AA6NL82 134 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 H0YL77 283 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 IFNL4K9M1U5 179 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 MLNRO43193 412 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 OSMP13725 252 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 PRKACGP22612 351 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 SRP14P37108 136 aaKnown RBP17.11■□□□□ 0.33
CLK3-225ENST00000569063 SRP9P49458 86 aaKnown RBP17.11■□□□□ 0.33
CLK3-225ENST00000569063 HNRNPA0Q13151 305 aaKnown RBP17.11■□□□□ 0.33
CLK3-225ENST00000569063 GINS1Q14691 196 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 SNAI3Q3KNW1 292 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 PGAP1Q75T13 922 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 LRRC28Q86X40 367 aaPredicted RBP17.11■□□□□ 0.33
CLK3-225ENST00000569063 OR10AD1Q8NGE0 317 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 TMEM158Q8WZ71 300 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 SLAMF6Q96DU3 332 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 NRBF2Q96F24 287 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 MEGF10Q96KG7 1140 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 KCNJ15Q99712 375 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 COPS4Q9BT78 406 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 MED20Q9H944 212 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 MARCH7Q9H992 704 aa17.11■□□□□ 0.33
CLK3-225ENST00000569063 DYSFO75923 2080 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 RNF212BA8MTL3 300 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 ZNF878C9JN71 531 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 TMEM178BH3BS89 294 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 GLCEO94923 617 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 SBK2P0C263 348 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 PAICSP22234 425 aaKnown RBP17.1■□□□□ 0.33
CLK3-225ENST00000569063 POU1F1P28069 291 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 SLC6A9P48067 706 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 RASSF2P50749 326 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 MMP16P51512 607 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 BTG1P62324 171 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 CDK5Q00535 292 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 TMEM155Q4W5P6 130 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 FAHD2BQ6P2I3 314 aaPredicted RBP17.1■□□□□ 0.33
CLK3-225ENST00000569063 FAHD2AQ96GK7 314 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 INTS14Q96SY0 518 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 REPIN1Q9BWE0 567 aaKnown RBP17.1■□□□□ 0.33
CLK3-225ENST00000569063 NTN4Q9HB63 628 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 CENPMQ9NSP4 180 aa17.1■□□□□ 0.33
CLK3-225ENST00000569063 ATP5HO75947 161 aa17.09■□□□□ 0.33
CLK3-225ENST00000569063 PNPP00491 289 aa17.09■□□□□ 0.33
CLK3-225ENST00000569063 HMGN1P05114 100 aa17.09■□□□□ 0.33
CLK3-225ENST00000569063 GSTT1P30711 240 aa17.09■□□□□ 0.33
CLK3-225ENST00000569063 RBMXP38159 391 aaKnown RBP17.09■□□□□ 0.33
CLK3-225ENST00000569063 PRSS12P56730 875 aa17.09■□□□□ 0.33
CLK3-225ENST00000569063 TAF13Q15543 124 aa17.09■□□□□ 0.33
CLK3-225ENST00000569063 SHQ1Q6PI26 577 aaKnown RBP17.09■□□□□ 0.33
CLK3-225ENST00000569063 RHOUQ7L0Q8 258 aa17.09■□□□□ 0.33
CLK3-225ENST00000569063 MRPL21Q7Z2W9 205 aaKnown RBP17.09■□□□□ 0.33
CLK3-225ENST00000569063 SPICQ8N5J4 248 aa17.09■□□□□ 0.33
CLK3-225ENST00000569063 UBAP1Q9NZ09 502 aa17.09■□□□□ 0.33
CLK3-225ENST00000569063 ATRQ13535 2644 aa17.08■□□□□ 0.33
CLK3-225ENST00000569063 A0A0G2JMP0 313 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 A0A0X1KG70 313 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 F5H5P2 479 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 HLA-DPB1P04440 258 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 ANOS1P23352 680 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 SLC15A1P46059 708 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 GRB2P62993 217 aaKnown RBP17.08■□□□□ 0.32
CLK3-225ENST00000569063 ZNF92Q03936 586 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 EIF2B1Q14232 305 aaKnown RBP17.08■□□□□ 0.32
CLK3-225ENST00000569063 ZMYND11Q15326 602 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 ZNF181Q2M3W8 571 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 DPY19L4Q7Z388 723 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 ERI1Q8IV48 349 aaKnown RBP17.08■□□□□ 0.32
CLK3-225ENST00000569063 TIGD4Q8IY51 512 aa17.08■□□□□ 0.32
CLK3-225ENST00000569063 KLHL36Q8N4N3 616 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms