RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 COPS4Q9BT78 406 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 WACQ9BTA9 647 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 ABHD6Q9BV23 337 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 OR10A4Q9H209 315 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 OBP2BQ9NPH6 170 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 MRPS18AQ9NVS2 196 aaKnown RBP6.71□□□□□ -1.34
SMG1-214ENST00000568038 PAK1IP1Q9NWT1 392 aaPredicted RBP6.71□□□□□ -1.34
SMG1-214ENST00000568038 CNOT2Q9NZN8 540 aaKnown RBP6.71□□□□□ -1.34
SMG1-214ENST00000568038 ERVK-18Q9QC07 812 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 IKZF2Q9UKS7 526 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 PCDHGB1Q9Y5G3 927 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 TMEM14AQ9Y6G1 99 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 SPENQ96T58 3664 aaKnown RBP6.71□□□□□ -1.34
SMG1-214ENST00000568038 HCFC1P51610 2035 aa6.71□□□□□ -1.34
SMG1-214ENST00000568038 CACNA1CQ13936 2221 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 NBEAQ8NFP9 2946 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 PRR14LQ5THK1 2151 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 IQCMA0A1B0GVH7 501 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 A1L4Q6 167 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 CLEC18AA5D8T8 446 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 PRR32B1ATL7 298 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 PHYHO14832 338 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 SYNGR3O43761 229 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 CDK1P06493 297 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 PIPP12273 146 aaPredicted RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 CCL2P13500 99 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 MYL12AP19105 171 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 CCNOP22674 350 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 DCKP27707 260 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 C21orf33P30042 268 aaPredicted RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 HTR5AP47898 357 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 CHN2P52757 468 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 CDH15P55291 814 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 SUMO1P63165 101 aaKnown RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 ACTC1P68032 377 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 ACTA1P68133 377 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 HIST1H3AP68431 136 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 SORDQ00796 357 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 GALK2Q01415 458 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 RAB35Q15286 201 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 ELFN2Q5R3F8 820 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 HIST2H3PS2Q5TEC6 136 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 ZNF322Q6U7Q0 402 aaPredicted RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 CLEC18BQ6UXF7 455 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 LRRN1Q6UXK5 716 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 HIST2H3AQ71DI3 136 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 KRT77Q7Z794 578 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 MYPOPQ86VE0 399 aaPredicted RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 CLEC18CQ8NCF0 446 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 OR1F12Q8NHA8 337 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 Q8TCH9 128 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 ST7LQ8TDW4 575 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 SNX33Q8WV41 574 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 IPCEF1Q8WWN9 437 aaPredicted RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 ASB17Q8WXJ9 295 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 SLC7A6Q92536 515 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 MYDGFQ969H8 173 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 ZNF75AQ96N20 296 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 WWC2-AS2Q96NR7 200 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 MNTQ99583 582 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 ATF6BQ99941 703 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 YTHDF1Q9BYJ9 559 aaKnown RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 CCDC90BQ9GZT6 254 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 FGF20Q9NP95 211 aaPredicted RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 PNRC2Q9NPJ4 139 aaKnown RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 FKBP14Q9NWM8 211 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 CHCHD3Q9NX63 227 aaKnown RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 SLCO1C1Q9NYB5 712 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 NPAP1Q9NZP6 1156 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 BLOC1S6Q9UL45 172 aa6.7□□□□□ -1.34
SMG1-214ENST00000568038 DIMT1Q9UNQ2 313 aaKnown RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 EXOSC1Q9Y3B2 195 aaKnown RBP6.7□□□□□ -1.34
SMG1-214ENST00000568038 LOC100509620A0A075B734 347 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 IGHV1-18A0A0C4DH31 117 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 C5orf49A4QMS7 147 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 ZNF878C9JN71 531 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 F5H5K5 113 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 J3QLW9 94 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 J3QRE1 110 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 CASKO14936 926 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 RGS10O43665 173 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 CLDN1O95832 211 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 MT-ND2P03891 347 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 SERPINA5P05154 406 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 H2BFMP0C1H6 154 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 CECR9P0C854 216 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 LIMS3P0CW19 117 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 LIMS4P0CW20 117 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 ZNF14P17017 642 aaPredicted RBP6.69□□□□□ -1.34
SMG1-214ENST00000568038 ZNF19P17023 458 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 STOMP27105 288 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 APLNRP35414 380 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 KIR2DL3P43628 341 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 GDI2P50395 445 aaKnown RBP6.69□□□□□ -1.34
SMG1-214ENST00000568038 ETV1P50549 477 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 PRKXP51817 358 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 OR12D2P58182 307 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 SLC35A2P78381 396 aa6.69□□□□□ -1.34
SMG1-214ENST00000568038 GALEQ14376 348 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms