RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 RAD51AP1Q96B01 352 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 HAVCR1Q96D42 359 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TM4SF19Q96DZ7 209 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SNF8Q96H20 258 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SMIM10Q96HG1 83 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CABS1Q96KC9 395 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SERPINB12Q96P63 405 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 RAB3IPQ96QF0 476 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR2A5Q96R48 311 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 HBEGFQ99075 208 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 NAP1L3Q99457 506 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 VAT1Q99536 393 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 EBNA1BP2Q99848 306 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 SMR3AQ99954 134 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 KLHDC3Q9BQ90 382 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SELENOSQ9BQE4 189 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 KIFC1Q9BW19 673 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CARD6Q9BX69 1037 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 FUT8Q9BYC5 575 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SHCBP1LQ9BZQ2 653 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 RAB33BQ9H082 229 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ILKAPQ9H0C8 392 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR51B5Q9H339 312 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TRABDQ9H4I3 376 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 LRRC40Q9H9A6 602 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 UCK1Q9HA47 277 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 GRPEL1Q9HAV7 217 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SH2D2AQ9NP31 389 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 MRPS30Q9NP92 439 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 NANSQ9NR45 359 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PNO1Q9NRX1 252 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 HOMER3Q9NSC5 361 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 FARSBQ9NSD9 589 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 SMOXQ9NWM0 555 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 BFARQ9NZS9 450 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TAC3Q9UHF0 121 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PCYOX1Q9UHG3 505 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ANAPC5Q9UJX4 755 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 C3orf18Q9UK00 162 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 FBXO5Q9UKT4 447 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 FBXW2Q9UKT8 454 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 NPIPA1Q9UND3 350 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 DIMT1Q9UNQ2 313 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 CHMP2BQ9UQN3 213 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 BTRCQ9Y297 605 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 DHRS7Q9Y394 339 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 RNF11Q9Y3C5 154 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ITPR3Q14573 2671 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CADP27708 2225 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ARHGAP32A7KAX9 2087 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CSPG4Q6UVK1 2322 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 HYDINQ4G0P3 5121 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 MYO9AB2RTY4 2548 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 LRRK2Q5S007 2527 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MAST4O15021 2626 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 IGHV1-45A0A0A0MS14 117 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 NSG1A0A0A6YYJ2 146 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 IGHV3-64DA0A0J9YX35 117 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 A0A0J9YY10 115 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 A0A1B0GX78 115 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TCRBV9S1A1TA0A576 114 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 HEATR9A2RTY3 570 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 A4D1N5 150 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 PSMB11A5LHX3 300 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 LRIT2A6NDA9 550 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SMIM23A6NLE4 172 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 GABRR3A8MPY1 467 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MIF4GDA9UHW6 222 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 GPR89AB7ZAQ6 455 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 C21orf140B9A014 251 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 C9J4A7 227 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 E5RI56 91 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 NPIPA2E9PIF3 369 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 DNALI1O14645 258 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 NDC80O14777 642 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SH2D1BO14796 132 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 TOX3O15405 576 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 CFLARO15519 480 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ERI3O43414 337 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 EFNA2O43921 213 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 PSIP1O75475 530 aaKnown RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 TRAPPC6AO75865 159 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 OR2J2O76002 312 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MYO1DO94832 1006 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CLDN9O95484 217 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 HSPA4LO95757 839 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 ECDO95905 644 aaPredicted RBP0.92□□□□□ -2.26
SMG1-212ENST00000566328 GAS8O95995 478 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 C1QAP02745 245 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 FTH1P02794 183 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 MT-ND3P03897 115 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 SHBGP04278 402 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 IFNA16P05015 189 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 C2P06681 752 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 KLK1P06870 262 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 GSTA1P08263 222 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 CT62P0C5K7 136 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 RHOXF2BP0C7M4 288 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 GPR89BP0CG08 455 aa0.92□□□□□ -2.26
SMG1-212ENST00000566328 C1GALT1C1LP0DN25 315 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms