RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CIARTQ8N365 385 aaPredicted RBP22.34■■□□□ 1.17
NME3-208ENST00000565379 BPIFB6Q8NFQ5 453 aa22.34■■□□□ 1.17
NME3-208ENST00000565379 OR52I1Q8NGK6 324 aa22.34■■□□□ 1.17
NME3-208ENST00000565379 OR5L1Q8NGL2 311 aa22.34■■□□□ 1.17
NME3-208ENST00000565379 SLC7A6Q92536 515 aa22.34■■□□□ 1.17
NME3-208ENST00000565379 AKAP1Q92667 903 aaKnown RBP eCLIP22.34■■□□□ 1.17
NME3-208ENST00000565379 PIGTQ969N2 578 aa22.34■■□□□ 1.17
NME3-208ENST00000565379 APOBEC3DQ96AK3 386 aaPredicted RBP22.34■■□□□ 1.17
NME3-208ENST00000565379 DHRS9Q9BPW9 319 aa22.34■■□□□ 1.17
NME3-208ENST00000565379 CISD1Q9NZ45 108 aaKnown RBP22.34■■□□□ 1.17
NME3-208ENST00000565379 PSORS1C1Q9UIG5 152 aa22.34■■□□□ 1.17
NME3-208ENST00000565379 NSD1Q96L73 2696 aaPredicted RBP22.34■■□□□ 1.17
NME3-208ENST00000565379 HEATR1Q9H583 2144 aaKnown RBP22.33■■□□□ 1.17
NME3-208ENST00000565379 CSPG4Q6UVK1 2322 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 HS3ST1O14792 307 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 FAM20BO75063 409 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 KRT8P05787 483 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 DBHP09172 617 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 INHBBP09529 407 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 PLEKHG7Q6ZR37 379 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 SPATC1Q76KD6 591 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 SNX33Q8WV41 574 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 FBXW5Q969U6 566 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 TBX5Q99593 518 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 C1QTNF5Q9BXJ0 243 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 CA10Q9NS85 328 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 FAIMQ9NVQ4 179 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 IKZF2Q9UKS7 526 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 TPRKBQ9Y3C4 175 aa22.33■■□□□ 1.17
NME3-208ENST00000565379 H3BSA7 217 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 WNT5AP41221 380 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 RIDAP52758 137 aaKnown RBP22.32■■□□□ 1.16
NME3-208ENST00000565379 ACTA2P62736 377 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 ACTG2P63267 376 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 LRRN1Q6UXK5 716 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 COLCA1Q6ZS62 124 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 ZNF283Q8N7M2 679 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 ZNF611Q8N823 705 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 GGHQ92820 318 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 TMEM80Q96HE8 168 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 DOK1Q99704 481 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 SLCO1C1Q9NYB5 712 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 DIMT1Q9UNQ2 313 aaKnown RBP22.32■■□□□ 1.16
NME3-208ENST00000565379 LRP12Q9Y561 859 aa22.32■■□□□ 1.16
NME3-208ENST00000565379 ACOD1A6NK06 481 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 E7EQL1 145 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 SLC1A7O00341 560 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 TACSTD2P09758 323 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 APOBEC3AP31941 199 aaPredicted RBP22.31■■□□□ 1.16
NME3-208ENST00000565379 SLC6A9P48067 706 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 CX3CR1P49238 355 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 ZNF85Q03923 595 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 GALEQ14376 348 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 ZNF829Q3KNS6 432 aaPredicted RBP22.31■■□□□ 1.16
NME3-208ENST00000565379 RBM48Q5RL73 367 aaKnown RBP22.31■■□□□ 1.16
NME3-208ENST00000565379 ZNF540Q8NDQ6 660 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 ABHD4Q8TB40 342 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 Q96MF0 132 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 CHCHD3Q9NX63 227 aaKnown RBP22.31■■□□□ 1.16
NME3-208ENST00000565379 BLOC1S6Q9UL45 172 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 EXOSC1Q9Y3B2 195 aaKnown RBP22.31■■□□□ 1.16
NME3-208ENST00000565379 CMAHPQ9Y471 501 aa22.31■■□□□ 1.16
NME3-208ENST00000565379 TRIM64A6NGJ6 449 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 TRIM64BA6NI03 449 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 METTL15A6NJ78 407 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 XPNPEP2O43895 674 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 LCKP06239 509 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 FAM157BP0CG42 384 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 MYL12AP19105 171 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 PTH2RP49190 550 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 PRKXP51817 358 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 PSMA6P60900 246 aaKnown RBP22.3■■□□□ 1.16
NME3-208ENST00000565379 CDONQ4KMG0 1287 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 RGS7BPQ6MZT1 257 aaPredicted RBP22.3■■□□□ 1.16
NME3-208ENST00000565379 FAM220AQ7Z4H9 259 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 ZNF101Q8IZC7 436 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 LRRC75A-AS1Q8N1F1 130 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 OR52H1Q8NGJ2 320 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 OR1J1Q8NGS3 322 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 HAVCR2Q8TDQ0 301 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 MYDGFQ969H8 173 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 FKBP14Q9NWM8 211 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 MYRFQ9Y2G1 1151 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 LRRC42Q9Y546 428 aa22.3■■□□□ 1.16
NME3-208ENST00000565379 FN1P02751 2386 aaKnown RBP22.3■■□□□ 1.16
NME3-208ENST00000565379 PLCE1Q9P212 2302 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 LCATP04180 440 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 THBS4P35443 961 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 FABP6P51161 128 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 PPP1CBP62140 327 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 ST3GAL4Q11206 333 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 ZNF684Q5T5D7 378 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 CLEC9AQ6UXN8 241 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 SYS1Q8N2H4 156 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 STX19Q8N4C7 294 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 RFLNBQ8N5W9 214 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 TMEM171Q8WVE6 324 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 YTHDF1Q9BYJ9 559 aaKnown RBP22.29■■□□□ 1.16
NME3-208ENST00000565379 ERVK13-1Q9NX77 482 aa22.29■■□□□ 1.16
NME3-208ENST00000565379 MRM2Q9UI43 246 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms