RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 RHOXF1Q8NHV9 184 aa13.69□□□□□ -0.22
RAB40C-208ENST00000564703 MYEF2Q9P2K5 600 aaKnown RBP13.69□□□□□ -0.22
RAB40C-208ENST00000564703 CGGBP1Q9UFW8 167 aaPredicted RBP13.69□□□□□ -0.22
RAB40C-208ENST00000564703 MYO9AB2RTY4 2548 aa13.69□□□□□ -0.22
RAB40C-208ENST00000564703 E9PQ18 207 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 TPD52L2O43399 206 aaKnown RBP13.68□□□□□ -0.22
RAB40C-208ENST00000564703 TBX1O43435 398 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 ZNF254O75437 659 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 NAT2P11245 290 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 SELEP16581 610 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
RAB40C-208ENST00000564703 OPRL1P41146 370 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 MTNR1AP48039 350 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 ZNF81P51508 661 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 DSCR9P59020 149 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 PSG7Q13046 419 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 TESK1Q15569 626 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 CLEC12BQ2HXU8 276 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 FBXW12Q6X9E4 464 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 SPNS3Q6ZMD2 512 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 PGAP1Q75T13 922 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 MRPL21Q7Z2W9 205 aaKnown RBP13.68□□□□□ -0.22
RAB40C-208ENST00000564703 ENTHD1Q8IYW4 607 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 ZCCHC24Q8N2G6 241 aaKnown RBP13.68□□□□□ -0.22
RAB40C-208ENST00000564703 AMELYQ99218 206 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 RHNO1Q9BSD3 238 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 TPK1Q9H3S4 243 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 ADGRL4Q9HBW9 690 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 BRD7Q9NPI1 651 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 PURGQ9UJV8 347 aaKnown RBP13.68□□□□□ -0.22
RAB40C-208ENST00000564703 IKZF2Q9UKS7 526 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 PCDHGB1Q9Y5G3 927 aa13.68□□□□□ -0.22
RAB40C-208ENST00000564703 C17orf100A8MU93 164 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 CXCR4P61073 352 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 HLXQ14774 488 aaPredicted RBP13.67□□□□□ -0.22
RAB40C-208ENST00000564703 PCGF3Q3KNV8 242 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 CLEC2AQ6UVW9 174 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 LRRN1Q6UXK5 716 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 USP51Q70EK9 711 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 ZNF679Q8IYX0 411 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 OR10H4Q8NGA5 316 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 OR52H1Q8NGJ2 320 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 PGAM5Q96HS1 289 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 SORCS2Q96PQ0 1159 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 DIRC2Q96SL1 478 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 MYCBPQ99417 103 aaPredicted RBP13.67□□□□□ -0.22
RAB40C-208ENST00000564703 OR10A2Q9H208 303 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 DECR2Q9NUI1 292 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 ZDHHC8Q9ULC8 765 aa13.67□□□□□ -0.22
RAB40C-208ENST00000564703 RPL36Q9Y3U8 105 aaKnown RBP13.67□□□□□ -0.22
RAB40C-208ENST00000564703 MAST4O15021 2626 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 H0YAE9 185 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 DLGAP1O14490 977 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 XRCC2O43543 280 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 SPRY3O43610 288 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 CSF3P09919 207 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 SLC2A1P11166 492 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 KITLGP21583 273 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 CAPGP40121 348 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 RIDAP52758 137 aaKnown RBP13.66□□□□□ -0.22
RAB40C-208ENST00000564703 IL18R1Q13478 541 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 RIPK1Q13546 671 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 CARTPTQ16568 116 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 OR2T2Q6IF00 324 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 ZNF322Q6U7Q0 402 aaPredicted RBP13.66□□□□□ -0.22
RAB40C-208ENST00000564703 FAM57BQ71RH2 274 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 TGIF2LYQ8IUE0 185 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 WFDC11Q8NEX6 87 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 SPRYD4Q8WW59 207 aaPredicted RBP13.66□□□□□ -0.22
RAB40C-208ENST00000564703 RNFT2Q96EX2 444 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 Q96MF0 132 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 OR8B4Q96RC9 309 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 TBX5Q99593 518 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 EGLN1Q9GZT9 426 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 POFUT1Q9H488 388 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 MYOZ1Q9NP98 299 aaPredicted RBP13.66□□□□□ -0.22
RAB40C-208ENST00000564703 AASSQ9UDR5 926 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 KLHDC2Q9Y2U9 406 aa13.66□□□□□ -0.22
RAB40C-208ENST00000564703 TMEM269A0A1B0GVZ9 245 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 DAPL1A0PJW8 107 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 GGT3PA6NGU5 568 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 PSMD9O00233 223 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 APOL3O95236 402 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 KRT8P05787 483 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 TNFSF4P23510 183 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 CFL1P23528 166 aaKnown RBP13.65□□□□□ -0.22
RAB40C-208ENST00000564703 DCTDP32321 178 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 PDLIM4P50479 330 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 MMP15P51511 669 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 ZNF121P58317 390 aaPredicted RBP13.65□□□□□ -0.22
RAB40C-208ENST00000564703 ADARB1P78563 741 aaKnown RBP13.65□□□□□ -0.22
RAB40C-208ENST00000564703 ROM1Q03395 351 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 EGR3Q06889 387 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 GK2Q14410 553 aaPredicted RBP13.65□□□□□ -0.22
RAB40C-208ENST00000564703 TIGD6Q17RP2 521 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 KLHL22Q53GT1 634 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 ZNF691Q5VV52 312 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 OR5AS1Q8N127 324 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 UBASH3BQ8TF42 649 aa13.65□□□□□ -0.22
RAB40C-208ENST00000564703 FAM168AQ92567 244 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms