RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 LIPNQ5VXI9 398 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 FAM57BQ71RH2 274 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 SLC25A40Q8TBP6 338 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 IPCEF1Q8WWN9 437 aaPredicted RBP13.35□□□□□ -0.27
CDH11-209ENST00000564317 APOBEC3DQ96AK3 386 aaPredicted RBP13.35□□□□□ -0.27
CDH11-209ENST00000564317 BCL2L14Q9BZR8 327 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 ZNF442Q9H7R0 627 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 UBTD1Q9HAC8 227 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 BRD7Q9NPI1 651 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 CISD1Q9NZ45 108 aaKnown RBP13.35□□□□□ -0.27
CDH11-209ENST00000564317 FZR1Q9UM11 496 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 SPEF1Q9Y4P9 236 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 ABCA4P78363 2273 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 J3QLW9 94 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 ZNF19P17023 458 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 MYL12AP19105 171 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 MPV17P39210 176 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 ACTA2P62736 377 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 ACTG2P63267 376 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 ADIPOQQ15848 244 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 ZNF829Q3KNS6 432 aaPredicted RBP13.34□□□□□ -0.27
CDH11-209ENST00000564317 GLYATL3Q5SZD4 288 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 ARL9Q6T311 187 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 FAM220AQ7Z4H9 259 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 SYS1Q8N2H4 156 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 OR8B12Q8NGG6 310 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 SPRYD4Q8WW59 207 aaPredicted RBP13.34□□□□□ -0.27
CDH11-209ENST00000564317 RORBQ92753 470 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 MYDGFQ969H8 173 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 PPP1R14AQ96A00 147 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 PELI1Q96FA3 418 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 MARS2Q96GW9 593 aaKnown RBP13.34□□□□□ -0.27
CDH11-209ENST00000564317 DHRS9Q9BPW9 319 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 OR2J1Q9GZK6 312 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 G6PC2Q9NQR9 355 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 LRCH1Q9Y2L9 728 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 R4GMQ9 66 aa13.34□□□□□ -0.27
CDH11-209ENST00000564317 TMEM269A0A1B0GVZ9 245 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 E9PI62 339 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 J3QW42 95 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 RGS10O43665 173 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 APOC1P02654 83 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 OR4A8P0C604 315 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 MMP16P51512 607 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 PRSS12P56730 875 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 RPS23P62266 143 aaKnown RBP13.33□□□□□ -0.28
CDH11-209ENST00000564317 IRF3Q14653 427 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 HLXQ14774 488 aaPredicted RBP13.33□□□□□ -0.28
CDH11-209ENST00000564317 RGS7BPQ6MZT1 257 aaPredicted RBP13.33□□□□□ -0.28
CDH11-209ENST00000564317 LRP11Q86VZ4 500 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 KLHL36Q8N4N3 616 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 ZNF485Q8NCK3 441 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 OR2AE1Q8NHA4 323 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 FBXW5Q969U6 566 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 PGAM5Q96HS1 289 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 CDCA4Q9BXL8 241 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.28
CDH11-209ENST00000564317 BLOC1S6Q9UL45 172 aa13.33□□□□□ -0.28
CDH11-209ENST00000564317 CAB39Q9Y376 341 aaPredicted RBP13.33□□□□□ -0.28
CDH11-209ENST00000564317 RAI1Q7Z5J4 1906 aaPredicted RBP13.33□□□□□ -0.28
CDH11-209ENST00000564317 HEATR1Q9H583 2144 aaKnown RBP13.33□□□□□ -0.28
CDH11-209ENST00000564317 HRNRQ86YZ3 2850 aaPredicted RBP13.32□□□□□ -0.28
CDH11-209ENST00000564317 ROS1P08922 2347 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 LOC110117498-PIK3R3F6TDL0 507 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 TBX1O43435 398 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 CLPTM1O96005 669 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 KIR3DL2P43630 455 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 FABP6P51161 128 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 CDH15P55291 814 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 NANOS3P60323 173 aaKnown RBP13.32□□□□□ -0.28
CDH11-209ENST00000564317 GABARAPL2P60520 117 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 ZNF92Q03936 586 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 RNLSQ5VYX0 342 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 ZNF544Q6NX49 715 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 KCTD20Q7Z5Y7 419 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 CATSPERDQ86XM0 798 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 PRSS35Q8N3Z0 413 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 ZNF611Q8N823 705 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 OR52N1Q8NH53 320 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 KLF14Q8TD94 323 aaPredicted RBP13.32□□□□□ -0.28
CDH11-209ENST00000564317 NRGNQ92686 78 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 MRPL24Q96A35 216 aaKnown RBP13.32□□□□□ -0.28
CDH11-209ENST00000564317 SGK3Q96BR1 496 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 MRPL48Q96GC5 212 aaKnown RBP13.32□□□□□ -0.28
CDH11-209ENST00000564317 SYT3Q9BQG1 590 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 YTHDF1Q9BYJ9 559 aaKnown RBP13.32□□□□□ -0.28
CDH11-209ENST00000564317 PBOV1Q9GZY1 135 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 CHCHD3Q9NX63 227 aaKnown RBP13.32□□□□□ -0.28
CDH11-209ENST00000564317 MYEF2Q9P2K5 600 aaKnown RBP13.32□□□□□ -0.28
CDH11-209ENST00000564317 NUFIP1Q9UHK0 495 aaKnown RBP13.32□□□□□ -0.28
CDH11-209ENST00000564317 GTF2A1LQ9UNN4 478 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 SLC22A13Q9Y226 551 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 CMAHPQ9Y471 501 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 BAHCC1Q9P281 2608 aa13.32□□□□□ -0.28
CDH11-209ENST00000564317 PLCE1Q9P212 2302 aa13.31□□□□□ -0.28
CDH11-209ENST00000564317 TMEM129A0AVI4 362 aa13.31□□□□□ -0.28
CDH11-209ENST00000564317 LALBAP00709 142 aa13.31□□□□□ -0.28
CDH11-209ENST00000564317 MT-ND5P03915 603 aa13.31□□□□□ -0.28
CDH11-209ENST00000564317 SOD3P08294 240 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms