RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 TMEM246Q9BRR3 403 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 PCDHAC1Q9H158 963 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 ELOVL3Q9HB03 270 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 TUBG2Q9NRH3 451 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 MAN2C1Q9NTJ4 1040 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 TBCCD1Q9NVR7 557 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 THAP1Q9NVV9 213 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 VAPAQ9P0L0 249 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 MIOXQ9UGB7 285 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 SLC13A4Q9UKG4 626 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 SLC7A7Q9UM01 511 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 TIMM10BQ9Y5J6 103 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 POMT1Q9Y6A1 747 aa4.36□□□□□ -1.71
AC055855.3-201ENST00000564269 NUP214P35658 2090 aaPredicted RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 CENPVL3A0A0U1RRI6 287 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 TRAPPC13A5PLN9 417 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 NPIPB13A6NJU9 1138 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 MARCH11A6NNE9 402 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 NPIPB4C9JG80 1138 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 G3V4G9 280 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 IFNL4K9M1U5 179 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 M0QX08 132 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 TNFRSF13BO14836 293 aaPredicted RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 SURF4O15260 269 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 RGS16O15492 202 aaPredicted RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 ERLIN1O75477 346 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 IGF2P01344 180 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 MT-ND1P03886 318 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 OPN1SWP03999 348 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 COX5BP10606 129 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 MMP9P14780 707 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 GSTM3P21266 225 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 PPIBP23284 216 aaKnown RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 PMELP40967 661 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 MRPL19P49406 292 aaKnown RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 FGF12P61328 243 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 PCBD1P61457 104 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 ENDOGQ14249 297 aaKnown RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 TAF11Q15544 211 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 ZNF181Q2M3W8 571 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 KRT71Q3SY84 523 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 ZNF404Q494X3 552 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 RUNDC3AQ59EK9 446 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 KPRPQ5T749 579 aaPredicted RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 GPR157Q5UAW9 335 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 RUSC1-AS1Q66K80 236 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 ARL9Q6T311 187 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 LYPD2Q6UXB3 125 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 FOXL2NBQ6ZUU3 175 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 HDDC2Q7Z4H3 204 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 PTOV1Q86YD1 416 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 NKAIN4Q8IVV8 208 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 ZSCAN4Q8NAM6 433 aaPredicted RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 NPEPL1Q8NDH3 523 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 MOSPD2Q8NHP6 518 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 PFN4Q8NHR9 129 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 VANGL1Q8TAA9 524 aaPredicted RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 AENQ8WTP8 325 aaKnown RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 SSMEM1Q8WWF3 244 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 LIPHQ8WWY8 451 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 PTP4A1Q93096 173 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 PLEKHA8Q96JA3 519 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 MPP4Q96JB8 637 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 PAIP2Q9BPZ3 127 aaKnown RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 SLC30A2Q9BRI3 323 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 C16orf95Q9H693 158 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 TCF7L1Q9HCS4 588 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 KCNK9Q9NPC2 374 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 INIPQ9NRY2 104 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 C20orf141Q9NUB4 165 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 NDRG4Q9ULP0 352 aaKnown RBP4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 STARD10Q9Y365 291 aa4.35□□□□□ -1.71
AC055855.3-201ENST00000564269 DNAH3Q8TD57 4116 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 C5orf63A6NC05 138 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 GMNCA6NCL1 334 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 EVPLLA8MZ36 301 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 ZNF879B4DU55 563 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 GPR137BO60478 399 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 OR7A10O76100 309 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 GASTP01350 101 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 IGHV4-59P01825 116 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 PRB2P02812 416 aaPredicted RBP4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 SFTPBP07988 381 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 NR2C1P13056 603 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 CFHR2P36980 270 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 PSMB10P40306 273 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 RBM34P42696 430 aaKnown RBP4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 IER3P46695 156 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 PITPNBP48739 271 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 CD47Q08722 323 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 ALG10Q5BKT4 473 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 TTMPQ5BVD1 217 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 FAM201AQ5SY85 155 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 WDR25Q64LD2 544 aaPredicted RBP4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 EPGNQ6UW88 154 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 DLEU7Q6UYE1 221 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 Q6ZSV7 163 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 SLC30A8Q8IWU4 369 aa4.34□□□□□ -1.71
AC055855.3-201ENST00000564269 OR5AS1Q8N127 324 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms