RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 DIRC2Q96SL1 478 aa14.1□□□□□ -0.15
CDT1-202ENST00000562747 CIB1Q99828 191 aa14.1□□□□□ -0.15
CDT1-202ENST00000562747 BEX2Q9BXY8 128 aa14.1□□□□□ -0.15
CDT1-202ENST00000562747 PTTG3PQ9NZH4 202 aa14.1□□□□□ -0.15
CDT1-202ENST00000562747 ZDHHC8Q9ULC8 765 aa14.1□□□□□ -0.15
CDT1-202ENST00000562747 SAC3D1A6NKF1 404 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 ACHEP22303 614 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 USF1P22415 310 aaPredicted RBP14.09□□□□□ -0.15
CDT1-202ENST00000562747 EPHA2P29317 976 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 CCL8P80075 99 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 RIN1Q13671 783 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 EIF2B1Q14232 305 aaKnown RBP14.09□□□□□ -0.15
CDT1-202ENST00000562747 TAF13Q15543 124 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 C12orf73Q69YU5 71 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 DRAM2Q6UX65 266 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 RHOUQ7L0Q8 258 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 GTF3AQ92664 365 aaKnown RBP14.09□□□□□ -0.15
CDT1-202ENST00000562747 KCNJ15Q99712 375 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 COPS4Q9BT78 406 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 C19orf24Q9BVV8 132 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 GABARAPL3Q9BY60 117 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 BPESC1Q9GZL8 116 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 CHODLQ9H9P2 273 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 S100A14Q9HCY8 104 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 CENPMQ9NSP4 180 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 DECR2Q9NUI1 292 aa14.09□□□□□ -0.15
CDT1-202ENST00000562747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.08□□□□□ -0.163e-7■■■■□ 20.1
CDT1-202ENST00000562747 ZSCAN5BA6NJL1 495 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 PRKYO43930 277 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 IGHV1-46P01743 117 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 LCATP04180 440 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 SLC15A1P46059 708 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 RPS7P62081 194 aaKnown RBP14.08□□□□□ -0.16
CDT1-202ENST00000562747 GRB2P62993 217 aaKnown RBP14.08□□□□□ -0.16
CDT1-202ENST00000562747 EFNB1P98172 346 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 MALLQ13021 153 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 APOFQ13790 326 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 CYB5R2Q6BCY4 276 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 ZNF454Q8N9F8 522 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 BBS1Q8NFJ9 593 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 OTOSQ8NHW6 89 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 ABHD6Q9BV23 337 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 SHARPINQ9H0F6 387 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 TOR3AQ9H497 397 aa14.08□□□□□ -0.16
CDT1-202ENST00000562747 LYNX1G3V0Z9 82 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 TPD52L2O43399 206 aaKnown RBP14.07□□□□□ -0.16
CDT1-202ENST00000562747 SPRY3O43610 288 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 SELENOFO60613 162 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 CD55P08174 381 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 LYNX1P0DP58 116 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 SELEP16581 610 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 COL8A2P25067 703 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 SLC6A9P48067 706 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 CDK5R2Q13319 367 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 GGTLC2Q14390 218 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 HLXQ14774 488 aaPredicted RBP14.07□□□□□ -0.16
CDT1-202ENST00000562747 TSTQ16762 297 aaKnown RBP14.07□□□□□ -0.16
CDT1-202ENST00000562747 LCN1P1Q5VSP4 162 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 NAA40Q86UY6 237 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 TCEANCQ8N8B7 351 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 TMEM163Q8TC26 289 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 RNF133Q8WVZ7 376 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 YIPF5Q969M3 257 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 TEAD3Q99594 435 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 EGLN1Q9GZT9 426 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 SAP30LQ9HAJ7 183 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 MSL2Q9HCI7 577 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 USE1Q9NZ43 259 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 LPAR3Q9UBY5 353 aa14.07□□□□□ -0.16
CDT1-202ENST00000562747 IGHV1-69-2A0A0G2JMI3 117 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 IQCF6A8MYZ5 107 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 LMX1BO60663 402 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 RP2O75695 350 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 APOC1P02654 83 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 ALPLP05186 524 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 LYNP07948 512 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 TACSTD2P09758 323 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 CRYBB2P43320 205 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 TMEM33P57088 247 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 NXNL2Q5VZ03 156 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 RIBC2Q9H4K1 309 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 H2AFY2Q9P0M6 372 aaPredicted RBP14.06□□□□□ -0.16
CDT1-202ENST00000562747 ORC6Q9Y5N6 252 aa14.06□□□□□ -0.16
CDT1-202ENST00000562747 IGHV4-61A0A0C4DH41 118 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 CCDC182A6NF36 153 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 SLC22A31A6NKX4 558 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 EI24O14681 340 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 TNFSF4P23510 183 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 HSD11B1P28845 292 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 POLR2IP36954 125 aaKnown RBP14.05□□□□□ -0.16
CDT1-202ENST00000562747 OPRL1P41146 370 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 NAA10P41227 235 aaPredicted RBP14.05□□□□□ -0.16
CDT1-202ENST00000562747 GPR6P46095 362 aaPredicted RBP14.05□□□□□ -0.16
CDT1-202ENST00000562747 ALDH3A2P51648 485 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 PRKXP51817 358 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 RAD23AP54725 363 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 GK2Q14410 553 aaPredicted RBP14.05□□□□□ -0.16
CDT1-202ENST00000562747 SNAI3Q3KNW1 292 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 AADACL4Q5VUY2 407 aa14.05□□□□□ -0.16
CDT1-202ENST00000562747 OR2T2Q6IF00 324 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms