RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SORCS2Q96PQ0 1159 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 APOL4Q9BPW4 351 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 SYT3Q9BQG1 590 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 ZNF649Q9BS31 505 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 COPS4Q9BT78 406 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 JAM3Q9BX67 310 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 BARX1Q9HBU1 254 aaPredicted RBP11.47□□□□□ -0.57
CDH1-204ENST00000562118 H2AFY2Q9P0M6 372 aaPredicted RBP11.47□□□□□ -0.57
CDH1-204ENST00000562118 LAMP5Q9UJQ1 280 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 GRIP1Q9Y3R0 1128 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 LRP12Q9Y561 859 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 PMF1-BGLAPU3KQ54 211 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 C5orf63A6NC05 138 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 ACOD1A6NK06 481 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 M0R233 179 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
CDH1-204ENST00000562118 IGHA1P01876 353 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 MRPL3P09001 348 aaKnown RBP11.46□□□□□ -0.57
CDH1-204ENST00000562118 DBTP11182 482 aaKnown RBP11.46□□□□□ -0.57
CDH1-204ENST00000562118 LIPAP38571 399 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 MMP16P51512 607 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 EFNA4P52798 201 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 HCCSP53701 268 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 ZNF91Q05481 1191 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 GK2Q14410 553 aaPredicted RBP11.46□□□□□ -0.57
CDH1-204ENST00000562118 SPATA46Q5T0L3 261 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 LAIR2Q6ISS4 152 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 KCTD18Q6PI47 426 aaPredicted RBP11.46□□□□□ -0.57
CDH1-204ENST00000562118 SSX6Q7RTT6 188 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 DHRSXQ8N5I4 330 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 OR51G2Q8NGK0 314 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 OR5L1Q8NGL2 311 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 RNF166Q96A37 237 aaPredicted RBP11.46□□□□□ -0.57
CDH1-204ENST00000562118 Q96MT0 163 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 REPIN1Q9BWE0 567 aaKnown RBP11.46□□□□□ -0.57
CDH1-204ENST00000562118 VCXQ9H320 206 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 OR51B6Q9H340 312 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 MS4A5Q9H3V2 200 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 OPA3Q9H6K4 179 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 FAM206AQ9NX38 181 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 PURGQ9UJV8 347 aaKnown RBP11.46□□□□□ -0.57
CDH1-204ENST00000562118 FZR1Q9UM11 496 aa11.46□□□□□ -0.57
CDH1-204ENST00000562118 A0A1W2PQL4 384 aaPredicted RBP11.45□□□□□ -0.58
CDH1-204ENST00000562118 C17orf100A8MU93 164 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 IQCF6A8MYZ5 107 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 RRP9O43818 475 aaKnown RBP11.45□□□□□ -0.58
CDH1-204ENST00000562118 NDUFS7O75251 213 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 CD55P08174 381 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 GNAO1P09471 354 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 CX3CR1P49238 355 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 AQP4P55087 323 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 ATP5J2P56134 94 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 ZNF121P58317 390 aaPredicted RBP11.45□□□□□ -0.58
CDH1-204ENST00000562118 MRPS11P82912 194 aaKnown RBP11.45□□□□□ -0.58
CDH1-204ENST00000562118 ZNF85Q03923 595 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 MOGQ16653 247 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 LRRN1Q6UXK5 716 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 Q6ZR03 302 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 Q6ZSR3 168 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 SETD9Q8NE22 299 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 OR52H1Q8NGJ2 320 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 THEM6Q8WUY1 208 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 ITFG2Q969R8 447 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 LGALS12Q96DT0 336 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 PERPQ96FX8 193 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 CYSLTR2Q9NS75 346 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 CENPMQ9NSP4 180 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 TAAR3PQ9P1P4 343 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 ZNF319Q9P2F9 582 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 AASSQ9UDR5 926 aa11.45□□□□□ -0.58
CDH1-204ENST00000562118 MRM2Q9UI43 246 aaKnown RBP11.45□□□□□ -0.58
CDH1-204ENST00000562118 RRP15Q9Y3B9 282 aaKnown RBP11.45□□□□□ -0.58
CDH1-204ENST00000562118 A0A096LNT2 108 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 ZSCAN5BA6NJL1 495 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 SNTNA6NMZ2 147 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 H0YHG0 523 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 XRCC2O43543 280 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 SULT1C4O75897 302 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 CLIC3O95833 236 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 H2BFMP0C1H6 154 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 GCH1P30793 250 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 ALDH3B1P43353 468 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 PRKXP51817 358 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 SELENOVP59797 346 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 CXCR4P61073 352 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 ACTC1P68032 377 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 ACTA1P68133 377 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 ZNF92Q03936 586 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 RAB40BQ12829 278 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 CDK5R2Q13319 367 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 TNK1Q13470 666 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 ALKBH6Q3KRA9 238 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 CDONQ4KMG0 1287 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 FAM209AQ5JX71 171 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 Q5PR19 223 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 GLYATL3Q5SZD4 288 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 ZNF322Q6U7Q0 402 aaPredicted RBP11.44□□□□□ -0.58
CDH1-204ENST00000562118 ZNF771Q7L3S4 317 aaPredicted RBP11.44□□□□□ -0.58
CDH1-204ENST00000562118 NEU4Q8WWR8 484 aaPredicted RBP11.44□□□□□ -0.58
CDH1-204ENST00000562118 CMBLQ96DG6 245 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms