RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 INSM1Q01101 510 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 DBPQ10586 325 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 SRSF5Q13243 272 aaKnown RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 OR10K1Q8NGX5 313 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF707Q96C28 371 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF436Q9C0F3 470 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF71Q9NQZ8 489 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 SLC25A37Q9NYZ2 338 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 A0A0A6YYD5 115 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 PCSK6P29122 969 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 WIPI1Q5MNZ9 446 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 PRAMEF5Q5TYX0 476 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 PRAMEF6Q5VXH4 476 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 CATSPERDQ86XM0 798 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 FAM26EQ8N5C1 309 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF439Q8NDP4 499 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ABCA4P78363 2273 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 TUBGCP6Q96RT7 1819 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 CHD5Q8TDI0 1954 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ANKUB1A6NFN9 424 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 SULT1C2O00338 296 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ATP1B1P05026 303 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF26P17031 533 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 SIGLEC14Q08ET2 396 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 FAM213BQ8TBF2 198 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 SLC2A10O95528 541 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 CALCBP10092 127 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 EPHA8P29322 1005 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ETV1P50549 477 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 CLINT1Q14677 625 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF626Q68DY1 528 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 IL34Q6ZMJ4 242 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 FBXO17Q96EF6 278 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 KCNIP2Q9NS61 270 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 WDR1O75083 606 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 RNPS1Q15287 305 aaKnown RBP12.19□□□□□ -0.46
TRAF3-208ENST00000560371 CEACAM16Q2WEN9 425 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 CDC20BQ86Y33 519 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 ADGRF3Q8IZF5 1079 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 PLPP5Q8NEB5 264 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 JAM3Q9BX67 310 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 FBXL2Q9UKC9 423 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 TMEM129A0AVI4 362 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 FITM1A5D6W6 292 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF266Q14584 549 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 TMEM215Q68D42 235 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 Q6ZRG5 221 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 LGI3Q8N145 548 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 ANKRD53Q8N9V6 530 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 SPACA5Q96QH8 159 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 PKMYT1Q99640 499 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 ERVMER34-1Q9H9K5 563 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 PPP1R3CQ9UQK1 317 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 SH2D7A6NKC9 451 aaPredicted RBP12.19□□□□□ -0.46
TRAF3-208ENST00000560371 DIO1P49895 249 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 RPS27AP62979 156 aaKnown RBP12.19□□□□□ -0.46
TRAF3-208ENST00000560371 UBA52P62987 128 aaKnown RBP12.19□□□□□ -0.46
TRAF3-208ENST00000560371 IAH1Q2TAA2 248 aaPredicted RBP12.19□□□□□ -0.46
TRAF3-208ENST00000560371 OR1M1Q8NGA1 313 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 RBFOX1Q9NWB1 397 aaKnown RBP12.19□□□□□ -0.46
TRAF3-208ENST00000560371 FADS1O60427 444 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 OR1S2Q8NGQ3 325 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 I6L893 689 aaPredicted RBP12.19□□□□□ -0.46
TRAF3-208ENST00000560371 SIRPB1O00241 398 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 CPEP16870 476 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 FOXF1Q12946 379 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 EBPQ15125 230 aaKnown RBP12.19□□□□□ -0.46
TRAF3-208ENST00000560371 ACER2Q5QJU3 275 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 FAM74A1Q5RGS3 127 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 OR2AK2Q8NG84 335 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 HAAOP46952 286 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 ALKBH6Q3KRA9 238 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
TRAF3-208ENST00000560371 A0A0B4J2A0 478 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SMIM21Q3B7S5 101 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 ANKRD34AQ69YU3 496 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 KIRREL2Q6UWL6 708 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 CREB3L2Q70SY1 520 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 NRARPQ7Z6K4 114 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 ARV1Q9H2C2 271 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SHPKQ9UHJ6 478 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 TMEM200AQ86VY9 491 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SIAH3Q8IW03 269 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 GCNT2Q8N0V5 402 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 NANOGP1Q8N7R0 232 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 GPR119Q8TDV5 335 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 ELK1P19419 428 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 BMP5P22003 454 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 OR1J1Q8NGS3 322 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 PPIL1Q9Y3C6 166 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 K7EQM0 130 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SLC31A2O15432 143 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 APEX1P27695 318 aaKnown RBP12.18□□□□□ -0.46
TRAF3-208ENST00000560371 SSTR2P30874 369 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 ZNF121P58317 390 aaPredicted RBP12.18□□□□□ -0.46
TRAF3-208ENST00000560371 KCNIP4Q6PIL6 250 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 VASH2Q86V25 355 aa12.18□□□□□ -0.46
TRAF3-208ENST00000560371 OR1L3Q8NH93 324 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms